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    ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 [ Homo sapiens ]

    Gene ID: 57763, updated on 11-May-2012

    Summary

    Official Symbol
    ANKRA2provided by HGNC
    Official Full Name
    ankyrin repeat, family A (RFXANK-like), 2provided by HGNC
    Primary source
    HGNC:13208
    See related
    Ensembl:ENSG00000164331; HPRD:12044; MIM:605787; Vega:OTTHUMG00000102030
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRA

    Genomic context

    Location :
    5q12-q13
    Sequence :
    Chromosome: 5; NC_000005.9 (72848025..72861511, complement)
    See ANKRA2 in Epigenomics, MapViewer

    Chromosome 5 - NC_000005.9Genomic Context describing neighboring genes Neighboring gene FUN14 domain containing 2 pseudogene 1 Neighboring gene basic transcription factor 3 Neighboring gene UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) Neighboring gene 190 kDa guanine nucleotide exchange factor

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q9H9E1 P56524 HDAC4    HPRD  PubMed  
    Q9H9E1 Q9UQL6 HDAC5    HPRD  PubMed  
    Q9H9E1 P98164 LRP2    HPRD  PubMed  
    BioGRID:121758 BioGRID:121558 AHRR    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:121758 BioGRID:115106 HDAC4    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:121758 BioGRID:115331 HDAC5    BioGRID  PubMed Reconstituted Complex 
    BioGRID:121758 BioGRID:115083 HDAC9    BioGRID  PubMed Reconstituted Complex 
    BioGRID:121758 BioGRID:110216 LRP2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:121758 BioGRID:208005 Pias1    BioGRID  PubMed Two-hybrid 

    General gene information

    Markers

    Homology

    Pathways from BioSystems

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
     
    low-density lipoprotein particle binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane fraction IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ankyrin repeat family A protein 2
    Names
    ankyrin repeat family A protein 2
    RFXANK-like protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023039.4NP_075526.1  ankyrin repeat family A protein 2

      Status: VALIDATED

      Source sequence(s)
      AL558295, BC012917, DB543368
      Consensus CDS
      CCDS4020.1
      UniProtKB/Swiss-Prot
      Q9H9E1
      Related
      ENSP00000296785, OTTHUMP00000128195, ENST00000296785, OTTHUMT00000219814
      Conserved Domains (3) summary
      cd00204
      Location:176300
      Blast Score: 278
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      PHA03100
      Location:53242
      Blast Score: 131
      PHA03100; ankyrin repeat protein; Provisional
      pfam12796
      Location:186277
      Blast Score: 255
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000005.9 Reference GRCh37.p5 Primary Assembly

      Range
      72848025..72861511, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000137.1 Alternate HuRef

      Range
      68053527..68067013, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC010279.5 (89491..102826) None
    genomic CH471084.1 EAW95729.1
      EAW95730.1
    mRNA AF251051.1 AAK34941.1
    mRNA AF314032.1 AAK01621.1
    mRNA AK022876.1 BAB14288.1
    mRNA AL558295.3 None
    mRNA BC012917.1 AAH12917.1
    mRNA DB543368.1 None
    other-genetic DQ891551.2 ABM82477.1
    other-genetic DQ894738.2 ABM85664.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9H9E1.1 GenPept UniProtKB/Swiss-Prot:Q9H9E1

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