Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    lhv_0990 citrate lyase alpha chain [ Lactobacillus helveticus DPC 4571 ]

    Gene ID: 5771843, updated on 18-May-2013
    Gene symbol
    lhv_0990
    Gene description
    citrate lyase alpha chain
    Locus tag
    lhv_0990
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Lactobacillus helveticus DPC 4571 (strain: DPC 4571)
    Lineage
    Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
    Sequence :
    NC_010080.1 (973428..974969)

    NC_010080.1Genomic Context describing neighboring genes Neighboring gene transposase ISLhe15 Neighboring gene citrate lyase ligase Neighboring gene citrate lyase subunit gamma Neighboring gene citrate lyase beta chain Neighboring gene putative surface protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of Lactobacillus helveticus, an organism distinguished by selective gene loss and insertion sequence element expansion. Callanan M, et al. J Bacteriol, 2008 Jan. PMID 17993529.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • Biosynthesis of secondary metabolites, organism-specific biosystem (from KEGG)
      Biosynthesis of secondary metabolites, organism-specific biosystem
      Biosynthesis of secondary metabolites
    • Citrate cycle (TCA cycle), organism-specific biosystem (from KEGG)
      Citrate cycle (TCA cycle), organism-specific biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
    • Citrate cycle (TCA cycle), conserved biosystem (from KEGG)
      Citrate cycle (TCA cycle), conserved biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
    • Two-component system, organism-specific biosystem (from KEGG)
      Two-component system, organism-specific biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...
    • Two-component system, conserved biosystem (from KEGG)
      Two-component system, conserved biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...
    Names
    citrate lyase alpha chain

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010080.1

      Range
      973428..974969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001577363.1 citrate lyase alpha chain [Lactobacillus helveticus DPC 4571]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A8YUY4
      Conserved Domains (2) summary
      pfam13336
      Location:368 – 447
      Blast Score: 107
      AcetylCoA_hyd_C; Acetyl-CoA hydrolase/transferase C-terminal domain
      COG3051
      Location:1 – 513
      Blast Score: 1829
      CitF; Citrate lyase, alpha subunit [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000517.1 ABX27072.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...