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    LOC576866 serine/threonine-protein kinase TNNI3K-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 576866, updated on 17-Feb-2013
    Gene symbol
    LOC576866
    Gene description
    serine/threonine-protein kinase TNNI3K-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
    Location :
    chromosome: Un
    See LOC576866 in MapViewer

    NW_003577689.1Genomic Context describing neighboring genes Neighboring gene probable uridine nucleosidase 2-like Neighboring gene phosphatidylinositol 4-phosphate 5-kinase-like protein 1-like Neighboring gene RNA-directed DNA polymerase from mobile element jockey-like Neighboring gene 28S ribosomal protein S33, mitochondrial-like

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    serine/threonine-protein kinase TNNI3K-like

    RefSeqs of Annotated Genomes: Build 3.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_3.1 Primary Assembly

    Genomic

    1. NW_003577689.1

      Range
      261479..279243, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_777134.3 → XP_782227.3  

      Conserved Domains (5) summary
      cd00204
      Location:143 – 264
      Blast Score: 290
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam07714
      Location:472 – 728
      Blast Score: 584
      Pkinase_Tyr; Protein tyrosine kinase
      pfam12796
      Location:145 – 241
      Blast Score: 239
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:247 – 299
      Blast Score: 119
      Ank_4; Ankyrin repeats (many copies)
      cl09925
      Location:476 – 729
      Blast Score: 509
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    genomic AAGJ04152718.1 (12021..29785) None
    mRNA JT094779.1 None

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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