Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    Sare_0727 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ Salinispora arenicola CNS-205 ]

    Gene ID: 5704499, updated on 18-May-2013
    Gene symbol
    Sare_0727
    Gene description
    4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
    Locus tag
    Sare_0727
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salinispora arenicola CNS-205 (strain: CNS-205)
    Lineage
    Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micromonosporineae; Micromonosporaceae; Salinispora
    Sequence :
    NC_009953.1 (809753..810700)

    NC_009953.1Genomic Context describing neighboring genes Neighboring gene TatD family hydrolase Neighboring gene dimethyladenosine transferase Neighboring gene ABC transporter-like protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria. Penn K, et al. ISME J, 2009 Oct. PMID 19474814.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
    YP_001535637.1
    • catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009953.1

      Range
      809753..810700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001535637.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Salinispora arenicola CNS-205]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A8M223
      Conserved Domains (1) summary
      PRK03188
      Location:20 – 314
      Blast Score: 899
      PRK03188; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000850.1 ABV96646.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8M223.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...