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    YAE1D1 Yae1 domain containing 1 [ Homo sapiens ]

    Gene ID: 57002, updated on 11-May-2012
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    Summary

    Official Symbol
    YAE1D1provided by HGNC
    Official Full Name
    Yae1 domain containing 1provided by HGNC
    Primary source
    HGNC:24857
    Locus tag
    GK003
    See related
    Ensembl:ENSG00000241127; HPRD:16669; Vega:OTTHUMG00000128689
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GK003; C7orf36
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    Genomic context

    Location :
    7p14.1
    Sequence :
    Chromosome: 7; NC_000007.13 (39606003..39612480)
    See YAE1D1 in Epigenomics, MapViewer

    Chromosome 7 - NC_000007.13Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 41 homolog (S. cerevisiae) Neighboring gene POU class 6 homeobox 2 Neighboring gene thioredoxin-related transmembrane protein 1 pseudogene Neighboring gene akirin 1 pseudogene Neighboring gene v-ral simian leukemia viral oncogene homolog A (ras related)

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A directed protein interaction network for investigating intracellular signal transduction. Vinayagam A, et al. Sci Signal, 2011 Sep 6. PMID 21900206.
    2. Defining the human deubiquitinating enzyme interaction landscape. Sowa ME, et al. Cell, 2009 Jul 23. PMID 19615732.
    3. A human protein-protein interaction network: a resource for annotating the proteome. Stelzl U, et al. Cell, 2005 Sep 23. PMID 16169070.
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334.
    5. The DNA sequence of human chromosome 7. Hillier LW, et al. Nature, 2003 Jul 10. PMID 12853948.

    See all (8) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q9NRH1 Q12873 CHD3    HPRD  PubMed  
    Q9NRH1 Q9P2H0 KIAA1377    HPRD  PubMed  
    Q9NRH1 Q16890 TPD52L1    HPRD  PubMed  
    Q9NRH1 P08670 VIM    HPRD  PubMed  
    BioGRID:121317 BioGRID:122851 BBS10    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:107532 CHD3    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:107790 CRMP1    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:116936 HAUS5    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:109422 HNRNPA2B1    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:121617 KIAA1377    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:116865 MCF2L    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:124936 METTL18    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:116763 NACAD    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:121372 NAT14    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:111285 SERPINA4    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:124002 SLC25A33    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:113017 TPD52L1    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:120020 USP53    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121317 BioGRID:113272 VIM    BioGRID  PubMed Two-hybrid 
    BioGRID:121317 BioGRID:127842 ZNF579    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Genotypes

    Homology

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    General protein information

    Preferred Names
    yae1 domain-containing protein 1
    Names
    yae1 domain-containing protein 1
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020192.3 → NP_064577.1  yae1 domain-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      AF226046, AK314937
      Consensus CDS
      CCDS5459.1
      UniProtKB/TrEMBL
      B2RC46
      UniProtKB/Swiss-Prot
      Q9NRH1
      Related
      ENSP00000223273, OTTHUMP00000158871, ENST00000223273, OTTHUMT00000250586
      Conserved Domains (1) summary
      pfam09811
      Location:45 – 83
      Blast Score: 143
      Yae1_N; Essential protein Yae1, N terminal

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000007.13 Reference GRCh37.p5 Primary Assembly

      Range
      39606003..39612480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000139.1 Alternate HuRef

      Range
      39490080..39496557
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CRA_TCAGchr7v2

    Genomic

    1. AC_000068.1 Alternate CRA_TCAGchr7v2

      Range
      39643891..39650368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC011290.3 AAQ96864.1
    genomic CH236951.1 EAL23993.1
    genomic CH471073.1 EAW94120.1
    mRNA AF226046.1 AAF86946.1
    mRNA AK314937.1 BAG37443.1
    mRNA BC022043.1 AAH22043.1
    mRNA CR457198.1 CAG33479.1
    other-genetic DQ892829.2 ABM83755.1
    other-genetic DQ896074.2 ABM87073.1
    other-genetic DQ896075.2 ABM87074.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9NRH1.1 GenPept UniProtKB/Swiss-Prot:Q9NRH1
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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