These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_029860.1 RefSeqGene
- Range
- 5001..1254864
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001204065.1 → NP_001190994.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding region, in the 3' UTR and coding region, and contains an alternate in-frame exon compared to variant 1. The resulting isoform (d) has a shorter N-terminus, a longer and distinct C-terminus, and an additional segment compared to isoform a.
- Source sequence(s)
-
AC008126, AK315954, BC150204, BP193713, DB475766
- UniProtKB/TrEMBL
-
B7Z9I9
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000331256, OTTHUMP00000243464, ENST00000333732, OTTHUMT00000408430
- Conserved Domains (1) summary
-
- cl00273
Location:89 – 220
Blast Score: 525
- PH-like; Pleckstrin homology-like domain
-
NM_001204066.1 → NP_001190995.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and coding region, in the 3' UTR and coding region, lacks an alternate in-frame segment, and contains an alternate in-frame exon compared to variant 1. The resulting isoform (e) has a shorter N-terminus, a longer and distinct C-terminus, a missing segment, and an additional segment compared to isoform a.
- Source sequence(s)
-
BC026313, BC068451, BC150204
- Consensus CDS
-
CCDS55865.1
- UniProtKB/TrEMBL
-
F8VZR9
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000447312, OTTHUMP00000243461, ENST00000549025, OTTHUMT00000408427
- Conserved Domains (2) summary
-
- cl00273
Location:157 – 288
Blast Score: 526
- PH-like; Pleckstrin homology-like domain
- cl15755
Location:1 – 46
Blast Score: 231
- SAM_superfamily; SAM (Sterile alpha motif )
-
NM_001204067.1 → NP_001190996.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and coding region, in the 3' UTR and coding region, and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (f) has a shorter and distinct N-terminus, a longer and distinct C-terminus, and a missing segment compared to isoform a.
- Source sequence(s)
-
AK294191, BC026313, BC068451, BC150204
- Consensus CDS
-
CCDS55871.1
- UniProtKB/TrEMBL
-
B4DFP6
- UniProtKB/TrEMBL
-
F8VPM3
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000450015, OTTHUMP00000243463, ENST00000547446, OTTHUMT00000408429
- Conserved Domains (4) summary
-
- cd09499
Location:6 – 72
Blast Score: 345
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:77 – 141
Blast Score: 327
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:3 – 68
Blast Score: 181
- SAM; Sterile alpha motif.
- cl00273
Location:194 – 325
Blast Score: 534
- PH-like; Pleckstrin homology-like domain
-
NM_001204068.1 → NP_001190997.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR and coding region and in the 3' UTR and coding region compared to variant 1. The resulting isoform (g, also known as AIDA-1a) has a shorter and distinct N-terminus and a shorter and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AY281132, BC026313, BC142669, BC150204, DA690060
- Consensus CDS
-
CCDS55869.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000447839, OTTHUMP00000243468, ENST00000546960, OTTHUMT00000408435
- Conserved Domains (4) summary
-
- cd09499
Location:37 – 103
Blast Score: 345
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:108 – 172
Blast Score: 328
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:34 – 99
Blast Score: 182
- SAM; Sterile alpha motif.
- cl00273
Location:285 – 416
Blast Score: 536
- PH-like; Pleckstrin homology-like domain
-
NM_001204069.1 → NP_001190998.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform h
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR and coding region, in the 3' UTR and coding region, lacks an alternate in-frame exon, and contains an alternate in-frame exon compared to variant 1. The resulting isoform (h) has a shorter and distinct N-terminus, a longer and distinct C-terminus, a missing segment, and an additional segment compared to isoform a.
- Source sequence(s)
-
BC150204, DA690060
- Consensus CDS
-
CCDS55868.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000447999, OTTHUMP00000243460, ENST00000550693, OTTHUMT00000408426
- Conserved Domains (4) summary
-
- cd09499
Location:37 – 103
Blast Score: 347
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:108 – 172
Blast Score: 327
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:34 – 99
Blast Score: 182
- SAM; Sterile alpha motif.
- cl00273
Location:249 – 380
Blast Score: 534
- PH-like; Pleckstrin homology-like domain
-
NM_001204070.1 → NP_001190999.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform i
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR and coding region, in the 3' UTR and coding region, and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (i, also known as AIDA-1c) has a shorter and distinct N-terminus, a longer and distinct C-terminus, and a missing segment compared to isoform a.
- Source sequence(s)
-
AY753193, BC150204, DA690060
- Consensus CDS
-
CCDS55867.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000448205, OTTHUMP00000243467, ENST00000546568, OTTHUMT00000408434
- Conserved Domains (4) summary
-
- cd09499
Location:37 – 103
Blast Score: 346
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:108 – 172
Blast Score: 327
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:34 – 99
Blast Score: 181
- SAM; Sterile alpha motif.
- cl00273
Location:225 – 356
Blast Score: 534
- PH-like; Pleckstrin homology-like domain
-
NM_001204079.1 → NP_001191008.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform j
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR and coding region, in the 3' UTR and coding region, and contains an alternate in-frame exon compared to variant 1. The resulting isoform (j) has a shorter N-terminus, a longer and distinct C-terminus, and an additional segment compared to isoform a.
- Source sequence(s)
-
AC008126, AM980945, BC150204, BP193713, DB475766
- UniProtKB/TrEMBL
-
B1VKB5
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Conserved Domains (1) summary
-
- cl00273
Location:90 – 221
Blast Score: 525
- PH-like; Pleckstrin homology-like domain
-
NM_001204080.1 → NP_001191009.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform k
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR and coding region and in the 3' UTR and coding region compared to variant 1. The resulting isoform (k) has a shorter and distinct N-terminus and a longer and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC008126, AY356353, BC150204, BP193713, DB475766
- UniProtKB/TrEMBL
-
Q6V0K8
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Conserved Domains (1) summary
-
- cl00273
Location:65 – 196
Blast Score: 526
- PH-like; Pleckstrin homology-like domain
-
NM_001204081.1 → NP_001191010.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform l
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) differs in the 5' UTR and coding region compared to variant 1. The resulting isoform (l) has a shorter and distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AC008126, AC011248, AK294994, BC142669, BP193713, DB475766
- Consensus CDS
-
CCDS55864.1
- UniProtKB/TrEMBL
-
B4DH98
- UniProtKB/TrEMBL
-
F8WC27
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000345510, ENST00000341752
- Conserved Domains (1) summary
-
- cl00273
Location:65 – 196
Blast Score: 521
- PH-like; Pleckstrin homology-like domain
-
NM_020140.3 → NP_064525.1 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding region and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has a shorter and distinct N-terminus and lacks an alternate segment compared to isoform a.
- Source sequence(s)
-
AC011248, AC117377, BC142669, DA690060
- Consensus CDS
-
CCDS55866.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000448993, OTTHUMP00000243458, ENST00000549558, OTTHUMT00000408423
- Conserved Domains (4) summary
-
- cd09499
Location:37 – 103
Blast Score: 345
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:108 – 172
Blast Score: 325
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:34 – 99
Blast Score: 180
- SAM; Sterile alpha motif.
- cl00273
Location:225 – 356
Blast Score: 532
- PH-like; Pleckstrin homology-like domain
-
NM_152788.4 → NP_690001.3 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a, also known as AIDA-1b).
- Source sequence(s)
-
AC011248, AK124453, AY281131, BC142669, DA183756, DA783474
- Consensus CDS
-
CCDS55872.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000449629, OTTHUMP00000243457, ENST00000547776, OTTHUMT00000408421
- Conserved Domains (6) summary
-
- cd00204
Location:53 – 181
Blast Score: 319
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd09499
Location:811 – 877
Blast Score: 345
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:882 – 946
Blast Score: 324
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:808 – 873
Blast Score: 184
- SAM; Sterile alpha motif.
- pfam12796
Location:63 – 158
Blast Score: 242
- Ank_2; Ankyrin repeats (3 copies)
- cl00273
Location:1059 – 1190
Blast Score: 530
- PH-like; Pleckstrin homology-like domain
-
NM_181670.3 → NP_858056.2 ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding region, in the 3' UTR and coding region, and contains an alternate in-frame exon compared to variant 1. The resulting isoform (b) has a shorter and distinct N-terminus, a longer and distinct C-terminus, and an additional segment compared to isoform a.
- Source sequence(s)
-
BC026313, BC150204, DA690060
- Consensus CDS
-
CCDS55870.1
- UniProtKB/Swiss-Prot
-
Q7Z6G8
- Related
- ENSP00000448203, OTTHUMP00000243462, ENST00000549493, OTTHUMT00000408428
- Conserved Domains (4) summary
-
- cd09499
Location:37 – 103
Blast Score: 345
- SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
- cd09500
Location:108 – 172
Blast Score: 327
- SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
- smart00454
Location:34 – 99
Blast Score: 182
- SAM; Sterile alpha motif.
- cl00273
Location:309 – 440
Blast Score: 536
- PH-like; Pleckstrin homology-like domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000012.11 Reference GRCh37.p5 Primary Assembly
- Range
- 99128569..100378432, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000144.1 Alternate HuRef
- Range
- 96189664..97280648, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)