My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    C11orf16 chromosome 11 open reading frame 16 [ Homo sapiens ]

    Gene ID: 56673, updated on 11-May-2012
    Help top of page

    Summary

    Official Symbol
    C11orf16provided by HGNC
    Official Full Name
    chromosome 11 open reading frame 16provided by HGNC
    Primary source
    HGNC:1169
    See related
    Ensembl:ENSG00000176029; HPRD:12604; Vega:OTTHUMG00000165654
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Help top of page

    Genomic context

    Location :
    11p15.3
    Sequence :
    Chromosome: 11; NC_000011.9 (8941623..8954553, complement)
    See C11orf16 in Epigenomics, MapViewer

    Chromosome 11 - NC_000011.9Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, H/ACA box 45 Neighboring gene ribosomal protein L27a Neighboring gene suppression of tumorigenicity 5 Neighboring gene A kinase (PRKA) interacting protein 1 Neighboring gene achaete-scute complex homolog 3 (Drosophila) Neighboring gene TMEM9 domain family, member B

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560.
    2. Towards a proteome-scale map of the human protein-protein interaction network. Rual JF, et al. Nature, 2005 Oct 20. PMID 16189514.
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334.
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932.
    5. Comparative genomic sequencing reveals a strikingly similar architecture of a conserved syntenic region on human chromosome 11p15.3 (including gene ST5) and mouse chromosome 7. Amid C, et al. Cytogenet Cell Genet, 2001. PMID 11528127.

    See all (8) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q9NQ32 Q01844 EWSR1    HPRD  PubMed  
    BioGRID:121181 BioGRID:108431 EWSR1    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Genotypes

    Homology

    Help top of page

    General protein information

    Preferred Names
    uncharacterized protein C11orf16
    Names
    uncharacterized protein C11orf16
    Help top of page

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020643.2 → NP_065694.2  uncharacterized protein C11orf16

      Status: VALIDATED

      Source sequence(s)
      AC026894, AK074455, CA310676, DA399415
      Consensus CDS
      CCDS7794.1
      UniProtKB/Swiss-Prot
      Q9NQ32
      Related
      ENSP00000318999, OTTHUMP00000230642, ENST00000326053, OTTHUMT00000385626

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000011.9 Reference GRCh37.p5 Primary Assembly

      Range
      8941623..8954553, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000143.1 Alternate HuRef

      Range
      8611929..8624858, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC026894.7 (55052..67950) None
    genomic AJ400877.1 CAB92289.1
    genomic CH471064.2 EAW68611.1
      EAW68612.1
      EAW68613.1
    mRNA AK074455.1 None
    mRNA AK223377.1 BAD97097.1
    mRNA BC027865.1 AAH27865.1
    mRNA CA310676.1 None
    mRNA DA399415.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9NQ32.3 GenPept UniProtKB/Swiss-Prot:Q9NQ32
    Help top of page

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Medical
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous

      Supplemental Content

      Table of contents

      Links

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...