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Ube2d2a ubiquitin-conjugating enzyme E2D 2A [ Mus musculus (house mouse) ]

Gene ID: 56550, updated on 8-May-2016
Official Symbol
Ube2d2aprovided by MGI
Official Full Name
ubiquitin-conjugating enzyme E2D 2Aprovided by MGI
Primary source
MGI:MGI:1930715
See related
Ensembl:ENSMUSG00000091896
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ubc4; Ubc2e; Ube2d2; 1500034D03Rik
Orthologs
Location:
18; 18 B2
Exon count:
8
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 18 NC_000084.6 (35771559..35807172)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (35931213..35966826)

Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene transmembrane protein 173 Neighboring gene 40S ribosomal protein S25 Neighboring gene CXXC finger 5 Neighboring gene predicted gene, 41693

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
ubiquitin conjugating enzyme activity ISO
Inferred from Sequence Orthology
more info
PubMed 
ubiquitin-protein transferase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
protein K48-linked ubiquitination ISO
Inferred from Sequence Orthology
more info
 
protein autoubiquitination ISO
Inferred from Sequence Orthology
more info
 
protein polyubiquitination ISO
Inferred from Sequence Orthology
more info
 
protein ubiquitination ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
protein complex ISO
Inferred from Sequence Orthology
more info
PubMed 
ubiquitin ligase complex ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
ubiquitin-conjugating enzyme E2 D2
Names
(E3-independent) E2 ubiquitin-conjugating enzyme D2
E2 ubiquitin-conjugating enzyme D2
E2(17)KB 2
ubiquitin carrier protein D2
ubiquitin conjugating enzyme 2e
ubiquitin-conjugating enzyme E2(17)KB 2
ubiquitin-conjugating enzyme E2-17 kDa 2
ubiquitin-conjugating enzyme E2D 2
ubiquitin-protein ligase D2
NP_064296.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019912.2NP_064296.1  ubiquitin-conjugating enzyme E2 D2

    See identical proteins and their annotated locations for NP_064296.1

    Status: VALIDATED

    Source sequence(s)
    AK147568, AK148089, BE688817, BY136374
    Consensus CDS
    CCDS50254.1
    UniProtKB/Swiss-Prot
    P62838
    UniProtKB/TrEMBL
    Q3UT95
    Related
    ENSMUSP00000132446, ENSMUST00000170693
    Conserved Domains (2) summary
    COG5078
    Location:1147
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:4142
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000084.6 Reference GRCm38.p3 C57BL/6J

    Range
    35771559..35807172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006526120.2XP_006526183.1  

    See identical proteins and their annotated locations for XP_006526183.1

    Conserved Domains (2) summary
    COG5078
    Location:1118
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cd00195
    Location:1113
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

Alternate Mm_Celera

Genomic

  1. AC_000040.1 Alternate Mm_Celera

    Range
    36227229..36263010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)