These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001194990.1 → NP_001181919.1 7SK snRNA methylphosphate capping enzyme isoform B
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream AUG, compared to variant 1. The resulting protein (isoform B) has a shorter N-terminus, compared to isoform A. Variants 2, 3 and 4 encode the same isoform (B).
- Source sequence(s)
-
AC092849, AI432993, AK055964, CB152355
- Consensus CDS
-
CCDS55136.1
- UniProtKB/TrEMBL
-
B3KP86
- UniProtKB/TrEMBL
-
D6W5V7
- UniProtKB/Swiss-Prot
-
Q7L2J0
- Related
- ENSP00000400875, OTTHUMP00000207606, ENST00000414441, OTTHUMT00000339136
- Conserved Domains (1) summary
-
- cd02440
Location:80 – 147
Blast Score: 103
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
NM_001194991.1 → NP_001181920.1 7SK snRNA methylphosphate capping enzyme isoform B
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream AUG, compared to variant 1. The resulting protein (isoform B) has a shorter N-terminus, compared to isoform A. Variants 2, 3 and 4 encode the same isoform (B).
- Source sequence(s)
-
AC092849, AI432993, BC018935, CB152355, CD672398
- Consensus CDS
-
CCDS55136.1
- UniProtKB/TrEMBL
-
D6W5V7
- UniProtKB/Swiss-Prot
-
Q7L2J0
- Conserved Domains (1) summary
-
- cd02440
Location:80 – 147
Blast Score: 103
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
NM_001194992.1 → NP_001181921.1 7SK snRNA methylphosphate capping enzyme isoform B
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream AUG, compared to variant 1. The resulting protein (isoform B) has a shorter N-terminus, compared to isoform A. Variants 2, 3 and 4 encode the same isoform (B).
- Source sequence(s)
-
AC092849, AI432993, BC018935, BP217791
- Consensus CDS
-
CCDS55136.1
- UniProtKB/TrEMBL
-
D6W5V7
- UniProtKB/Swiss-Prot
-
Q7L2J0
- Conserved Domains (1) summary
-
- cd02440
Location:80 – 147
Blast Score: 103
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
NM_019606.5 → NP_062552.2 7SK snRNA methylphosphate capping enzyme isoform A
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (A).
- Source sequence(s)
-
AC092849, AI432993, BC016396, BC018935
- Consensus CDS
-
CCDS5693.1
- UniProtKB/Swiss-Prot
-
Q7L2J0
- Related
- ENSP00000308546, OTTHUMP00000207605, ENST00000310512, OTTHUMT00000339135
- Conserved Domains (2) summary
-
- cd02440
Location:446 – 512
Blast Score: 108
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
- pfam06859
Location:574 – 683
Blast Score: 570
- Bin3; Bicoid-interacting protein 3 (Bin3)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000007.13 Reference GRCh37.p5 Primary Assembly
- Range
- 100026413..100031749
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000139.1 Alternate HuRef
- Range
- 94659849..94665185
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CRA_TCAGchr7v2
Genomic
-
AC_000068.1 Alternate CRA_TCAGchr7v2
- Range
- 99386498..99391834
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)