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    CTTNBP2NL CTTNBP2 N-terminal like [ Homo sapiens ]

    Gene ID: 55917, updated on 11-May-2012

    Summary

    Official Symbol
    CTTNBP2NLprovided by HGNC
    Official Full Name
    CTTNBP2 N-terminal likeprovided by HGNC
    Primary source
    HGNC:25330
    See related
    Ensembl:ENSG00000143079; HPRD:10906; Vega:OTTHUMG00000011154
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FLJ13278; DKFZp547A023

    Genomic context

    Location :
    1p13.2
    Sequence :
    Chromosome: 1; NC_000001.10 (112938800..113003786)
    See CTTNBP2NL in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC643355 Neighboring gene thioredoxin pseudogene Neighboring gene microRNA 4256 Neighboring gene wingless-type MMTV integration site family, member 2B

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:121000 BioGRID:123842 CTTNBP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:207994 Dynll1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:124497 FAM40A    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:121534 FAM40B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:117369 MOB4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:119722 MST4    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:116400 PDCD10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:111507 PPP2CA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:111508 PPP2CB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:111510 PPP2R1A    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:111511 PPP2R1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:114011 STK24    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:115757 STK25    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:112674 STRN    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:118999 STRN3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:121000 BioGRID:118941 STRN4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:121000 BioGRID:120139 ZRANB1    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    actin cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    CTTNBP2 N-terminal-like protein
    Names
    CTTNBP2 N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018704.2NP_061174.1  CTTNBP2 N-terminal-like protein

      Status: VALIDATED

      Source sequence(s)
      AL354760, AL598321, BE645464, DA238082, DB236769
      Consensus CDS
      CCDS845.1
      UniProtKB/Swiss-Prot
      Q9P2B4
      Related
      ENSP00000271277, OTTHUMP00000012854, ENST00000271277, OTTHUMT00000030686
      Conserved Domains (2) summary
      pfam09727
      Location:4188
      Blast Score: 452
      CortBP2; Cortactin-binding protein-2
      TIGR02168
      Location:100283
      Blast Score: 125
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p5 Primary Assembly

      Range
      112938800..113003786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      110795912..110861154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AL354760.11 CAI22307.1
      CAI22308.1
    genomic AL450407.14 (5137..18105) None
    genomic CH471122.1 EAW56515.1
      EAW56516.1
      EAW56517.1
    mRNA AK022544.1 BAG51087.1
    mRNA AK023340.1 None
    mRNA AK055261.1 None
    mRNA AL359565.1 CAB94870.1
    mRNA AL598321.1 None
    mRNA BC016029.1 AAH16029.1
    mRNA BE645464.1 None
    mRNA DA238082.1 None
    mRNA DB236769.1 None
    other-genetic AM393552.1 CAL38429.1
    other-genetic AM393771.1 CAL38646.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9NPX3 GenPept UniProtKB/TrEMBL:Q9NPX3
    Q9P2B4.2 GenPept UniProtKB/Swiss-Prot:Q9P2B4

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