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tgm2l transglutaminase 2, like [ Danio rerio (zebrafish) ]

Gene ID: 559012, updated on 12-Apr-2014
Official Symbol
tgm2lprovided by ZNC
Official Full Name
transglutaminase 2, likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050420-97
Locus tag
DKEY-73N10.5
See related
Ensembl:ENSDARG00000093381; Vega:OTTDARG00000012941
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
si:dkey-73n10.5
See tgm2l in MapViewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Zv9 (GCF_000002035.4) 18 NC_007129.5 (18584710..18630813, complement)

Chromosome 18 - NC_007129.5Genomic Context describing neighboring genes Neighboring gene alanine--tRNA ligase, cytoplasmic-like Neighboring gene uncharacterized LOC101883407 Neighboring gene alanine--tRNA ligase, cytoplasmic-like Neighboring gene uncharacterized LOC797383 Neighboring gene si:dkey-73n10.4 Neighboring gene ADP-ribosylation factor-like 2 binding protein

Genomic Sequence:
NC_007129.5 chromosome 18 reference Zv9 Primary Assembly

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zv9 Primary Assembly

Genomic

  1. NC_007129.5 

    Range
    18584710..18630813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159150.1XP_005159207.1  

    See proteins identical to XP_005159207.1

    UniProtKB/TrEMBL
    A3KQ87
    Conserved Domains (3) summary
    smart00460
    Location:267359
    Blast Score: 215
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:10119
    Blast Score: 322
    Transglut_N; Transglutaminase family
    pfam00927
    Location:583680
    Blast Score: 247
    Transglut_C; Transglutaminase family, C-terminal ig like domain
  2. XM_682306.5XP_687398.2  

    See proteins identical to XP_687398.2

    UniProtKB/TrEMBL
    A3KQ87
    Related
    ENSDARP00000119989, OTTDARP00000013016, ENSDART00000142422, OTTDART00000015330
    Conserved Domains (3) summary
    smart00460
    Location:267359
    Blast Score: 215
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:10119
    Blast Score: 322
    Transglut_N; Transglutaminase family
    pfam00927
    Location:583680
    Blast Score: 247
    Transglut_C; Transglutaminase family, C-terminal ig like domain