These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001699.4 → NP_001690.2 tyrosine-protein kinase receptor UFO isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment of the coding region, compared to variant 1. It encodes a shorter isoform (2), that is missing an internal segment compared to isoform 1.
- Source sequence(s)
-
AC011510, AL556721, BC032229, DA478638, M76125, X66029
- Consensus CDS
-
CCDS12574.1
- UniProtKB/Swiss-Prot
-
P30530
- Conserved Domains (6) summary
-
- cd00063
Location:225 – 328
Blast Score: 121
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd00096
Location:53 – 126
Blast Score: 118
- Ig; Immunoglobulin domain
- cd05749
Location:141 – 222
Blast Score: 353
- Ig2_Tyro3_like; Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)
- cd05075
Location:527 – 798
Blast Score: 1503
- PTKc_Axl; Catalytic domain of the Protein Tyrosine Kinase, Axl
- pfam07679
Location:139 – 223
Blast Score: 91
- I-set; Immunoglobulin I-set domain
- smart00221
Location:529 – 794
Blast Score: 968
- STYKc; Protein kinase; unclassified specificity.
-
NM_021913.3 → NP_068713.2 tyrosine-protein kinase receptor UFO isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript, and encodes the longer isoform (1).
- Source sequence(s)
-
AC011510, AL556721, BC032229, DA478638, M76125, X66029
- Consensus CDS
-
CCDS12575.1
- UniProtKB/Swiss-Prot
-
P30530
- Related
- ENSP00000301178, OTTHUMP00000269992, ENST00000301178, OTTHUMT00000463323
- Conserved Domains (6) summary
-
- cd00063
Location:225 – 328
Blast Score: 121
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd00096
Location:53 – 126
Blast Score: 118
- Ig; Immunoglobulin domain
- cd05749
Location:141 – 222
Blast Score: 353
- Ig2_Tyro3_like; Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)
- cd05075
Location:536 – 807
Blast Score: 1503
- PTKc_Axl; Catalytic domain of the Protein Tyrosine Kinase, Axl
- pfam07679
Location:139 – 223
Blast Score: 91
- I-set; Immunoglobulin I-set domain
- smart00221
Location:538 – 803
Blast Score: 969
- STYKc; Protein kinase; unclassified specificity.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p10 Primary Assembly
Genomic
-
NC_000019.9 Reference GRCh37.p10 Primary Assembly
- Range
- 41725108..41767671
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000151.1 Alternate HuRef
- Range
- 38157139..38200126
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CHM1_1.0
Genomic
-
NC_018930.1 Alternate CHM1_1.0
- Range
- 41913351..41955930
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)