U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kbtbd11 kelch repeat and BTB domain containing 11 [ Danio rerio (zebrafish) ]

Gene ID: 557467, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
kbtbd11
Gene description
kelch repeat and BTB domain containing 11
See related
Ensembl:ENSDARG00000104958
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (25288066..25294864)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (25269629..25276460)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene CLN8 transmembrane ER and ERGIC protein Neighboring gene Rho guanine nucleotide exchange factor (GEF) 10 Neighboring gene peptidylprolyl isomerase E (cyclophilin E) Neighboring gene poly(A) binding protein, cytoplasmic 4 (inducible form)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
kelch repeat and BTB domain-containing protein 11
Names
kelch repeat and BTB (POZ) domain containing 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    25288066..25294864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005173579.4 → XP_005173636.1  kelch repeat and BTB domain-containing protein 11

    UniProtKB/TrEMBL
    A0A0G2KCC7, A0A8M2BL76
    Related
    ENSDARP00000129935.1, ENSDART00000161002.2
    Conserved Domains (5) summary
    smart00225
    Location:238 → 327
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd14735
    Location:327 → 364
    BACK_Kelch; BTB-And-C-terminal-Kelch (BACK) domain of Kelch-like proteins
    sd00038
    Location:454 → 499
    Kelch; KELCH repeat [structural motif]
    pfam00651
    Location:239 → 318
    BTB; BTB/POZ domain
    pfam01344
    Location:453 → 500
    Kelch_1; Kelch motif

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394991.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    217246..224026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021473178.1 → XP_021328853.1  kelch repeat and BTB domain-containing protein 11

    UniProtKB/TrEMBL
    A0A8M9PP98
    Conserved Domains (2) summary
    sd00038
    Location:454 → 499
    Kelch; KELCH repeat [structural motif]
    cl28614
    Location:238 → 652
    BTB; Broad-Complex, Tramtrack and Bric a brac
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.