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LOC5574224 coiled-coil domain-containing glutamate-rich protein 1 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5574224, updated on 23-Mar-2024

Summary

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Gene symbol
LOC5574224
Gene description
coiled-coil domain-containing glutamate-rich protein 1
See related
VectorBase:AAEL018207
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
CTL8; AAEL010992; AAEL010994
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Genomic context

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See LOC5574224 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 3 NC_035109.1 (96345629..96440701, complement)

Chromosome 3 - NC_035109.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene protein 5NUC Neighboring gene uncharacterized LOC110678698 Neighboring gene long-chain-fatty-acid--CoA ligase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035109.1 Chromosome 3 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing glutamate-rich protein 1; uncharacterized protein LOC5574224
Names
C-Type lectin (CTL)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035109.1 Reference AaegL5.0 Primary Assembly

    Range
    96345629..96440701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001661224.3 → XP_001661274.3  uncharacterized protein LOC5574224 isoform X1

    UniProtKB/TrEMBL
    A0A1S4G7V0
    Conserved Domains (1) summary
    smart00034
    Location:37 → 172
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

  2. XM_021850424.1 → XP_021706116.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6I8TQW6, Q16RE0

  3. XM_021850425.1 → XP_021706117.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6I8TQW6, Q16RE0

RNA

  1. XR_002501402.1 RNA Sequence

  2. XR_002501400.1 RNA Sequence

  3. XR_002501403.1 RNA Sequence

  4. XR_002501401.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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