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    MAP7D1 MAP7 domain containing 1 [ Homo sapiens ]

    Gene ID: 55700, updated on 8-Jan-2012

    Summary

    Official Symbol
    MAP7D1provided by HGNC
    Official Full Name
    MAP7 domain containing 1provided by HGNC
    Primary source
    HGNC:25514
    Locus tag
    PP2464
    See related
    Ensembl:ENSG00000116871; HPRD:07666; Vega:OTTHUMG00000007714
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RPRC1; PARCC1

    Genomic context

    Location :
    1p34.3
    Sequence :
    Chromosome: 1; NC_000001.10 (36621803..36646441)
    See MAP7D1 in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene collagen, type VIII, alpha 2 Neighboring gene trafficking protein particle complex 3 Neighboring gene thyroid hormone receptor associated protein 3 Neighboring gene SH3 domain containing 21

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    MAP7 domain containing 1 P02647 APOA1    HPRD  PubMed  
    MAP7 domain containing 1 P54259 ATN1    HPRD  PubMed  
    MAP7 domain containing 1 Q7L5N1 COPS6    HPRD  PubMed  
    MAP7 domain containing 1 Q5JY77 GPRASP1    HPRD  PubMed  
    MAP7 domain containing 1 Hypothetical protein DKFZp564O0523 RBM48    HPRD  PubMed  
    BioGRID:120825 BioGRID:106832 APOA1    BioGRID  PubMed Two-hybrid 
    BioGRID:120825 BioGRID:116176 COPS6    BioGRID  PubMed Two-hybrid 
    BioGRID:120825 BioGRID:115086 GPRASP1    BioGRID  PubMed Two-hybrid 
    BioGRID:120825 BioGRID:123855 RBM48    BioGRID  PubMed Two-hybrid 
    BioGRID:120825 BioGRID:230642 Tubb4b    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:120825 BioGRID:116077 USP20    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ10350, FLJ39022, MGC117315

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    spindle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    MAP7 domain-containing protein 1
    Names
    MAP7 domain-containing protein 1
    arginine/proline rich coiled-coil 1
    proline arginine rich coiled coil 1
    arginine/proline-rich coiled-coil domain-containing protein 1
    proline/arginine-rich coiled-coil domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018067.3NP_060537.3  MAP7 domain-containing protein 1

      Status: PROVISIONAL

      Source sequence(s)
      BC106053
      Consensus CDS
      CCDS30673.1
      UniProtKB/Swiss-Prot
      Q3KQU3
      Related
      ENSP00000362244, OTTHUMP00000228575, ENST00000373151, OTTHUMT00000382095

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p5 Primary Assembly

      Range
      36621803..36646441
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      34738524..34763152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC114484.2 (47748..57444) None
    genomic CH471059.2 EAX07381.1
      EAX07382.1
      EAX07383.1
      EAX07384.1
    mRNA AB033013.2 BAA86501.2
    mRNA AF064852.1 None
    mRNA AF218002.1 AAG17244.1
    mRNA AK001212.1 BAA91557.1
    mRNA AK095939.1 BAC04654.1
    mRNA AK096341.1 BAG53265.1
    mRNA AK309966.1 None
    mRNA AL136547.1 CAB66482.2
    mRNA AY007099.1 None
    mRNA BC003083.2 None
    mRNA BC015885.1 None
    mRNA BC027334.1 AAH27334.1
    mRNA BC057293.1 None
    mRNA BC067256.1 AAH67256.1
    mRNA BC082266.1 None
    mRNA BC106053.1 AAI06054.1
    mRNA BC111428.1 None
    mRNA BC128042.1 AAI28043.1
    mRNA CR457254.1 CAG33535.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q3KQU3.1 GenPept UniProtKB/Swiss-Prot:Q3KQU3
    Q6NX58 GenPept UniProtKB/TrEMBL:Q6NX58

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