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    RNF126 ring finger protein 126 [ Homo sapiens ]

    Gene ID: 55658, updated on 11-May-2012

    Summary

    Official Symbol
    RNF126provided by HGNC
    Official Full Name
    ring finger protein 126provided by HGNC
    Primary source
    HGNC:21151
    See related
    Ensembl:ENSG00000070423; HPRD:11501
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MGC1022; FLJ20552; MGC14317
    Summary
    The protein encoded by this gene contains a RING finger domain, a motif present in a variety of functionally distinct proteins and known to be involved in protein-protein and protein-DNA interactions. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    19p13.3
    Sequence :
    Chromosome: 19; NC_000019.9 (647526..663233, complement)
    See RNF126 in Epigenomics, MapViewer

    Chromosome 19 - NC_000019.9Genomic Context describing neighboring genes Neighboring gene polymerase (RNA) mitochondrial (DNA directed) Neighboring gene fibroblast growth factor 22 Neighboring gene follistatin-like 3 (secreted glycoprotein) Neighboring gene protease, serine, 57 Neighboring gene ribosomal protein S2 pseudogene 52

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q9BV68 P46379 BAG6    HPRD  PubMed  
    Q9BV68 Q92530 PSMF1    HPRD  PubMed  
    Q9BV68 P51668 UBE2D1    HPRD  PubMed  
    Q9BV68 P61077 UBE2D3    HPRD  PubMed  
    Q9BV68 Q9Y2X8 UBE2D4    HPRD  PubMed  
    BioGRID:120790 BioGRID:107843 CSNK2B    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:116806 FAF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:120790 BioGRID:109398 HMGCL    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:116336 NUDT3    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:111362 PLK1    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:114872 PSMF1    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:115384 SNUPN    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:113102 TSG101    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Reconstituted Complex 
    BioGRID:120790 BioGRID:113169 UBE2D1    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:113170 UBE2D2    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:113171 UBE2D3    BioGRID  PubMed Two-hybrid 
    BioGRID:120790 BioGRID:119641 UBE2D4    BioGRID  PubMed Two-hybrid 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    RING finger protein 126
    Names
    RING finger protein 126

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016713.1 RefSeqGene

      Range
      4995..20702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_194460.2NP_919442.1  RING finger protein 126

      Status: REVIEWED

      Source sequence(s)
      AC004156, AC004449, AK289616, BG773910
      Consensus CDS
      CCDS12039.1
      UniProtKB/TrEMBL
      A8K0Q1
      UniProtKB/Swiss-Prot
      Q9BV68
      Related
      ENSP00000292363, ENST00000292363
      Conserved Domains (3) summary
      cd00162
      Location:228273
      Blast Score: 124
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      pfam13923
      Location:227271
      Blast Score: 124
      zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
      pfam14369
      Location:1040
      Blast Score: 126
      zf-RING_3; zinc-finger

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000019.9 Reference GRCh37.p5 Primary Assembly

      Range
      647526..663233, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000151.1 Alternate HuRef

      Range
      417361..433064, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_017876.3: Suppressed sequence

      Description
      NM_017876.3: This RefSeq was permanently suppressed because it has a non-consensus splice site that does not have enough supporting evidence.

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC004156.1 (4539..18642) None
    genomic AC004449.1 AAC06149.1
    genomic CH471242.1 EAW61167.1
      EAW61168.1
      EAW61169.1
      EAW61170.1
      EAW61171.1
      EAW61172.1
      EAW61173.1
    mRNA AK000559.1 BAA91254.1
    mRNA AK289616.1 BAF82305.1
    mRNA AL360265.1 CAB96178.1
    mRNA BC001442.2 AAH01442.1
    mRNA BC025374.1 AAH25374.1
    mRNA BG773910.1 None
    mRNA BM558139.1 None
    mRNA BM810439.1 None
    mRNA CA440294.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    O60372 GenPept UniProtKB/TrEMBL:O60372
    Q9BV68.1 GenPept UniProtKB/Swiss-Prot:Q9BV68
    Q9NPN4 GenPept UniProtKB/TrEMBL:Q9NPN4

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