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taok3b TAO kinase 3b [ Danio rerio (zebrafish) ]

Gene ID: 555650, updated on 27-Mar-2024

Summary

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Official Symbol
taok3bprovided by ZNC
Official Full Name
TAO kinase 3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-060526-59
See related
Ensembl:ENSDARG00000094052 AllianceGenome:ZFIN:ZDB-GENE-060526-59
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-169j7.5
Summary
Orthologous to human TAOK3 (TAO kinase 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (32160802..32183704)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (31562348..31583549)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene tescalcin b Neighboring gene IL-6 subfamily cytokine M17 Neighboring gene myosin, heavy polypeptide 2, fast muscle specific Neighboring gene myosin heavy chain 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Identification, cDNA cloning, and mRNA localization of a zebrafish ortholog of leukemia inhibitory factor. Abe T, et al. Comp Biochem Physiol B Biochem Mol Biol, 2007 May. PMID 17307004
  2. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase TAO3-like
Names
taok3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    32160802..32183704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021476516.1 → XP_021332191.1  serine/threonine-protein kinase TAO3-like

    UniProtKB/TrEMBL
    A0A8M9Q9G6
    Related
    ENSDARP00000113257.1, ENSDART00000134472.2
    Conserved Domains (1) summary
    cl25732
    Location:13 → 423
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases