These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001130182.1 → NP_001123654.1 dnaJ homolog subfamily A member 4 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and 5' coding region, compared to variant 1, which results in a protein (isoform 2) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC090607, AK096616, AL133096
- Consensus CDS
-
CCDS45316.1
- UniProtKB/TrEMBL
-
Q69YX3
- UniProtKB/Swiss-Prot
-
Q8WW22
- Related
- ENSP00000378321, OTTHUMP00000184908, ENST00000394852, OTTHUMT00000289801
- Conserved Domains (5) summary
-
- cd06257
Location:7 – 57
Blast Score: 238
- DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
- PTZ00037
Location:2 – 394
Blast Score: 874
- PTZ00037; DnaJ_C chaperone protein; Provisional
- cd10719
Location:152 – 201
Blast Score: 144
- DnaJ_zf; Zinc finger domain of DnaJ and HSP40
- cd10747
Location:202 – 332
Blast Score: 349
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
- cl03262
Location:106 – 134
Blast Score: 91
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
-
NM_001130183.1 → NP_001123655.1 dnaJ homolog subfamily A member 4 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, compared to variant 1, which results in a protein (isoform 3) with a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC090607, AK096616, AL133096, BC031044, DA561365
- Consensus CDS
-
CCDS45317.1
- UniProtKB/TrEMBL
-
E9PDM9
- UniProtKB/TrEMBL
-
Q69YX3
- UniProtKB/TrEMBL
-
Q8N5Z4
- UniProtKB/Swiss-Prot
-
Q8WW22
- Related
- ENSP00000413499, OTTHUMP00000211600, ENST00000446172, OTTHUMT00000347701
- Conserved Domains (5) summary
-
- PRK14293
Location:17 – 66
Blast Score: 113
- PRK14293; chaperone protein DnaJ; Provisional
- cd10719
Location:125 – 174
Blast Score: 142
- DnaJ_zf; Zinc finger domain of DnaJ and HSP40
- cd10747
Location:175 – 305
Blast Score: 352
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
- cl02542
Location:9 – 38
Blast Score: 105
- DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
- cl03262
Location:79 – 107
Blast Score: 91
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
-
NM_018602.3 → NP_061072.3 dnaJ homolog subfamily A member 4 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC090607, AK096616, AL133096, BC021720, DB047940
- Consensus CDS
-
CCDS10299.2
- UniProtKB/TrEMBL
-
Q69YX3
- UniProtKB/Swiss-Prot
-
Q8WW22
- Related
- ENSP00000378324, OTTHUMP00000184907, ENST00000394855, OTTHUMT00000289800
- Conserved Domains (5) summary
-
- cd06257
Location:36 – 86
Blast Score: 240
- DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
- PTZ00037
Location:15 – 423
Blast Score: 885
- PTZ00037; DnaJ_C chaperone protein; Provisional
- cd10719
Location:181 – 230
Blast Score: 143
- DnaJ_zf; Zinc finger domain of DnaJ and HSP40
- cd10747
Location:231 – 361
Blast Score: 352
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
- cl03262
Location:135 – 163
Blast Score: 91
- DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000015.9 Reference GRCh37.p5 Primary Assembly
- Range
- 78556487..78574538
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000147.1 Alternate HuRef
- Range
- 55314570..55332634
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)