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    PNMAL1 paraneoplastic Ma antigen family-like 1 [ Homo sapiens ]

    Gene ID: 55228, updated on 11-May-2012
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    Summary

    Official Symbol
    PNMAL1provided by HGNC
    Official Full Name
    paraneoplastic Ma antigen family-like 1provided by HGNC
    Primary source
    HGNC:25578
    See related
    Ensembl:ENSG00000182013; HPRD:08552; Vega:OTTHUMG00000169421
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FLJ10781
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    Genomic context

    Location :
    19q13.32
    Sequence :
    Chromosome: 19; NC_000019.9 (46969748..46974820, complement)
    See PNMAL1 in Epigenomics, MapViewer

    Chromosome 19 - NC_000019.9Genomic Context describing neighboring genes Neighboring gene protein phosphatase 5, catalytic subunit Neighboring gene coiled-coil domain containing 8 Neighboring gene serine/threonine-protein phosphatase 5-like Neighboring gene paraneoplastic Ma antigen family-like 2 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 38

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. Wagner SA, et al. Mol Cell Proteomics, 2011 Oct. PMID 21890473.
    2. Expanding the substantial interactome of NEMO using protein microarrays. Fenner BJ, et al. PLoS One, 2010 Jan 20. PMID 20098747.
    3. The LIFEdb database in 2006. Mehrle A, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381901.
    4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560.
    5. Large-scale analysis of the human ubiquitin-related proteome. Matsumoto M, et al. Proteomics, 2005 Nov. PMID 16196087.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:120523 BioGRID:114089 IKBKG    BioGRID  PubMed Reconstituted Complex 
    BioGRID:120523 BioGRID:124135 PARD6G    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:120523 BioGRID:114667 PNMA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:120523 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Markers

    Genotypes

    Homology

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    General protein information

    Preferred Names
    PNMA-like protein 1
    Names
    PNMA-like protein 1
    PNMA-like 1
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103149.1 → NP_001096619.1  PNMA-like protein 1 isoform b

      Status: VALIDATED

      Source sequence(s)
      AL834344, BQ637225, BU844519, DA219062, DA325514
      Consensus CDS
      CCDS46124.1
      UniProtKB/Swiss-Prot
      Q86V59
      Related
      ENSP00000410273, ENST00000438932

    2. NM_018215.3 → NP_060685.2  PNMA-like protein 1 isoform a

      Status: VALIDATED

      Source sequence(s)
      AL834344, BC032508, BC051688, BQ637225, BU844519, DA219062, DA325514
      Consensus CDS
      CCDS33059.1
      UniProtKB/Swiss-Prot
      Q86V59
      Related
      ENSP00000318131, OTTHUMP00000241028, ENST00000313683, OTTHUMT00000403929

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000019.9 Reference GRCh37.p5 Primary Assembly

      Range
      46969748..46974820, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000151.1 Alternate HuRef

      Range
      43394987..43400070, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC011484.7 (48850..53879) None
    genomic CH471126.1 EAW57421.1
    mRNA AK001643.1 BAA91804.1
    mRNA AK096326.1 None
    mRNA AK290218.1 BAF82907.1
    mRNA AL834344.1 CAD39010.1
    mRNA BC026026.1 AAH26026.2
    mRNA BC032508.1 AAH32508.1
    mRNA BC051688.1 AAH51688.2
    mRNA BG708870.1 None
    mRNA BQ637225.1 None
    mRNA BU844519.1 None
    mRNA BX649091.1 None
    mRNA DA219062.1 None
    mRNA DA325514.1 None
    other-genetic AM392614.1 CAL37492.1
    other-genetic AM392763.1 CAL37641.1
    other-genetic AM393060.1 CAL37938.1
    other-genetic AM393231.1 CAL38109.1
    other-genetic AM393371.1 CAL38249.1
    other-genetic AM393581.1 CAL38458.1
    other-genetic EU832298.1 ACE87555.1
    other-genetic EU832382.1 ACE86867.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q86V59.2 GenPept UniProtKB/Swiss-Prot:Q86V59
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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