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Aats-lys lysyl-tRNA synthetase [ Apis mellifera (honey bee) ]

Gene ID: 551538, updated on 24-May-2014
Gene symbol
Aats-lys
Gene description
lysyl-tRNA synthetase
See related
BEEBASE:GB49155
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis
Also known as
GB12887
See Aats-lys in MapViewer
Location:
chromosome: LG3
Exon count :
8
Annotation release Status Assembly LG Location
102 current Amel_4.5 (GCF_000002195.4) LG3 NC_007072.3 (9609817..9613011, complement)

Linkage Group LG3 - NC_007072.3Genomic Context describing neighboring genes Neighboring gene GDP-fucose protein O-fucosyltransferase 1 Neighboring gene mediator of RNA polymerase II transcription subunit 15 Neighboring gene OTU domain-containing protein 6B-like Neighboring gene protein PIH1D3-like Neighboring gene transfer RNA threonine (anticodon UGU)

Genomic Sequence:
NC_007072.3 chromosome LG3 reference Amel_4.5 Primary Assembly

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 102

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_4.5 Primary Assembly

Genomic

  1. NC_007072.3 

    Range
    9609817..9613011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_623933.4XP_623936.2  

    Conserved Domains (3) summary
    PLN02502
    Location:7564
    Blast Score: 2242
    PLN02502; lysyl-tRNA synthetase
    cd00775
    Location:224562
    Blast Score: 1554
    LysRS_core; Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three ...
    cd04322
    Location:114221
    Blast Score: 409
    LysRS_N; LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. ...
  2. XM_006567968.1XP_006568031.1  

    UniProtKB/TrEMBL
    H9K6Z6
    Conserved Domains (3) summary
    PLN02502
    Location:36588
    Blast Score: 2233
    PLN02502; lysyl-tRNA synthetase
    cd00775
    Location:248586
    Blast Score: 1557
    LysRS_core; Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three ...
    cd04322
    Location:138245
    Blast Score: 408
    LysRS_N; LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. ...

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