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LOC5504841 ubiquitin carboxyl-terminal hydrolase 25 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5504841, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5504841
Gene description
ubiquitin carboxyl-terminal hydrolase 25
Locus tag
NEMVEDRAFT_v1g173572
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 9
Exon count:
26
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 9 NC_064042.1 (9065318..9083239)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834155.1 (40053..57695)

Chromosome 9 - NC_064042.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase catalytic subunit A Neighboring gene TM2 domain-containing protein 3 Neighboring gene testis-specific serine/threonine-protein kinase 3 Neighboring gene uncharacterized LOC116612464 Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 25
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064042.1 Reference jaNemVect1.1

    Range
    9065318..9083239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048732747.1 → XP_048588704.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X1

  2. XM_048732748.1 → XP_048588705.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X2

  3. XM_048732749.1 → XP_048588706.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X3

Nucleotide Protein
Heading Accession and Version

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