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PVX_082775 tryptophan--tRNA ligase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473440, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_082775
Gene description
tryptophan--tRNA ligase, putative
Locus tag
PVX_082775
Gene type
protein coding
RNA name
tryptophan--tRNA ligase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 12
Exon count:
2
Sequence:
Chromosome: 12; NC_009917.1 (704803..707758)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene CDK-related protein kinase 6, putative Neighboring gene mitochondrial intermediate peptidase, putative Neighboring gene nuclear movement protein, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan--tRNA ligase, putative
XP_001614155.1
  • encoded by transcript PVX_082775A; Apicoplast targeted protein. Curated by Stuart Ralph, Walter and Eliza Hall Institute of Medical Research, Australia.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    704803..707758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614105.1 → XP_001614155.1  tryptophan--tRNA ligase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614155.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S986, A0A0J9STT2, A0A0J9T8A1, A5K814
    Conserved Domains (2) summary
    TIGR00233
    Location:304 → 628
    trpS; tryptophanyl-tRNA synthetase
    cl00015
    Location:234 → 632
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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