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PVX_079880 ubiquitin carboxyl-terminal hydrolase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5472956, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_079880
Gene description
ubiquitin carboxyl-terminal hydrolase, putative
Locus tag
PVX_079880
Gene type
protein coding
RNA name
ubiquitin carboxyl-terminal hydrolase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 10
Exon count:
2
Sequence:
Chromosome: 10; NC_009915.1 (174346..177087)

Chromosome 10 - NC_009915.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, conserved Neighboring gene methionine aminopeptidase, putative Neighboring gene ubiquitin-conjugating enzyme E2, putative Neighboring gene DNA replication licensing factor MCM3, putative Neighboring gene transmembrane protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009915.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase, putative
XP_001613684.1
  • encoded by transcript PVX_079880A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009915.1 Reference assembly

    Range
    174346..177087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001613634.1 → XP_001613684.1  ubiquitin carboxyl-terminal hydrolase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001613684.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SAW6, A0A0J9STJ4, A0A0J9TBS9, A0A0J9WDH3, A0A1G4GYD3, A0A564ZVQ6, A0A8S4H8C6, A5K985
    Conserved Domains (2) summary
    cd16104
    Location:3 → 76
    Ubl_USP14_like; ubiquitin-like (Ubl) domain found in ubiquitin carboxyl-terminal hydrolase 14 (USP14) and similar proteins
    cl02553
    Location:111 → 574
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
Nucleotide Protein
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