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KCTD5 potassium channel tetramerization domain containing 5 [ Homo sapiens (human) ]

Gene ID: 54442, updated on 8-May-2016
Official Symbol
KCTD5provided by HGNC
Official Full Name
potassium channel tetramerization domain containing 5provided by HGNC
Primary source
HGNC:HGNC:21423
See related
Ensembl:ENSG00000167977 HPRD:13768; MIM:611285; Vega:OTTHUMG00000128930
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
16p13.3
Exon count:
6
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 16 NC_000016.10 (2682494..2709030)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (2732495..2759031)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene 3-phosphoinositide dependent protein kinase 2, pseudogene Neighboring gene uncharacterized LOC645644 Neighboring gene endogenous retrovirus group K13 member 1 Neighboring gene protease, serine 27 Neighboring gene SRRM2 antisense RNA 1 Neighboring gene serine/arginine repetitive matrix 2

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ20040

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein complex binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 
viral process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
BTB/POZ domain-containing protein KCTD5
Names
potassium channel tetramerisation domain containing 5

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_018992.3NP_061865.1  BTB/POZ domain-containing protein KCTD5

    See identical proteins and their annotated locations for NP_061865.1

    Status: VALIDATED

    Source sequence(s)
    BC007314, DA134449
    Consensus CDS
    CCDS10475.1
    UniProtKB/Swiss-Prot
    Q9NXV2
    Related
    ENSP00000301738, OTTHUMP00000159182, ENST00000301738, OTTHUMT00000250909
    Conserved Domains (1) summary
    pfam02214
    Location:46135
    BTB_2; BTB/POZ domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p2 Primary Assembly

    Range
    2682494..2709030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018927.2 Alternate CHM1_1.1

    Range
    2732526..2759062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)