Display Settings:

Format

Send to:

Choose Destination

    Sstr2 somatostatin receptor 2 [ Rattus norvegicus ]

    Gene ID: 54305, updated on 19-May-2012

    Summary

    Official Symbol
    Sstr2provided by RGD
    Official Full Name
    somatostatin receptor 2provided by RGD
    Primary source
    RGD:3763
    See related
    Ensembl:ENSRNOG00000002793
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Smstr2
    Summary
    binds somatostatin; mediates signaling in response to thermal pain; may play a role in regulation of intestinal peristalsis [RGD, Feb 2006]

    Genomic context

    Location :
    10q32.1
    Sequence :
    Chromosome: 10; NC_005109.2 (103246880..103254444)
    See Sstr2 in MapViewer

    Chromosome 10 - NC_005109.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein LOC689682 Neighboring gene solute carrier family 39 (metal ion transporter), member 11 Neighboring gene family with sequence similarity 104, member A Neighboring gene hypothetical LOC287798 Neighboring gene component of oligomeric golgi complex 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:248525 BioGRID:108085 DLG3    BioGRID  PubMed Two-hybrid 
    BioGRID:248525 BioGRID:116598 SHANK2    BioGRID  PubMed Far Western; Two-hybrid 
    BioGRID:248525 BioGRID:112523 SNTA1    BioGRID  PubMed Two-hybrid 
    BioGRID:248525 BioGRID:251104 Shank2    BioGRID  PubMed Affinity Capture-Western 

    General gene information

    Markers

    Homology

    • Homologs of the Sstr2 gene: The Sstr2 gene is conserved in human, chimpanzee, , dog, cow, mouse, chicken, zebrafish, fruit fly, mosquito, and C.elegans.
    • Map Viewer (Human, Mouse)

    Pathways from BioSystems

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    G-protein coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    PDZ domain binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    PDZ domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    signal transducer activity IEA
    Inferred from Electronic Annotation
    more info
     
    somatostatin receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    somatostatin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    G-protein coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to estradiol stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    cellular response to glucocorticoid stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    cerebellum development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    forebrain development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    inhibition of adenylate cyclase activity by G-protein signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    inhibition of adenylate cyclase activity by G-protein signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    peristalsis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    response to starvation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    spermatogenesis IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
     
    synaptic transmission ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane fraction IEA
    Inferred from Electronic Annotation
    more info
     
    membrane fraction ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    somatostatin receptor type 2
    Names
    somatostatin receptor type 2
    SS2R
    SS2-R
    SRIF-1
    SS-2-R
    somatostatin receptor subtype 2
    somatotropin release-inhibiting factor receptor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019348.1NP_062221.1  somatostatin receptor type 2

      Status: PROVISIONAL

      Source sequence(s)
      M96817
      UniProtKB/Swiss-Prot
      P30680
      Related
      ENSRNOP00000003735, ENSRNOT00000003735
      Conserved Domains (2) summary
      pfam00001
      Location:66312
      Blast Score: 544
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl10458
      Location:54327
      Blast Score: 134
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: Build 4.2

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly (based on RGSC_v3.4)

    Genomic

    1. NC_005109.2 Reference assembly (based on RGSC_v3.4)

      Range
      103246880..103254444
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate assembly (Rn_Celera)

    Genomic

    1. AC_000078.1 Alternate assembly (Rn_Celera)

      Range
      97271562..97278691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein Strain
    Heading Accession and Version
    genomic CH473948.1 EDM06514.1
      EDM06515.1
    mRNA M93273.1 AAA42165.1 OFA
    mRNA M96817.1 AAA42166.1
    mRNA X98234.1 CAA66886.1 Sprague-Dawley
    Protein Accession Links
    GenPept Link UniProtKB Link
    O08840 GenPept UniProtKB/TrEMBL:O08840
    P30680.1 GenPept UniProtKB/Swiss-Prot:P30680

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...