tmem167a transmembrane protein 167A [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tmem167aprovided by ZNC
Official Full Name: transmembrane protein 167Aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050320-29
See related: Ensembl:ENSDARG00000035914 AllianceGenome:ZFIN:ZDB-GENE-050320-29
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: tmem167; zgc:112458
Summary: Predicted to be involved in intracellular transport and protein secretion. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Orthologous to human TMEM167A (transmembrane protein 167A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (43110788..43117654, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (43282408..43289274, complement)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in intracellular transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein secretion	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein kish-A

Names: transmembrane protein 167

NP_001018875.2

EC 3.6.5.4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001023581.2 → NP_001018875.2 protein kish-A precursor

Status: VALIDATED

Source sequence(s)

BC091541, CR545479, EH480890

UniProtKB/Swiss-Prot

Q5BJC2

UniProtKB/TrEMBL

F1R8Q0

Related

ENSDARP00000084398.4, ENSDART00000089965.6

Conserved Domains (1) summary

pfam06842
Location:10 → 44

DUF1242; Protein of unknown function (DUF1242)