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BLA-DQB MHC class II antigen [ Bos taurus (cattle) ]

Gene ID: 539241, updated on 4-Jul-2015
Gene symbol
BLA-DQB
Gene description
MHC class II antigen
See related
BGD:BT28314; Ensembl:ENSBTAG00000019588
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
DQB; DQB1; OLA-DQB; BoLA-DQB
See BLA-DQB in MapViewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 23 AC_000180.1 (25855145..25863045, complement)

Chromosome 23 - AC_000180.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101903155 Neighboring gene uncharacterized LOC104975658 Neighboring gene butyrophilin subfamily 1 member A1 Neighboring gene uncharacterized LOC101903211

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Homology

Clone Names

  • MGC128114

Gene Ontology Provided by GOA

Process Evidence Code Pubs
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 
immune response IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
boLa class II histocompatibility antigen, DQB*0101 beta chain
Names
DQB1*1A
MHC class II OLA-DQ-alpha
boLA-DQB
major histocompatibility complex antigen class II
major histocompatibility complex class II

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034668.3NP_001029840.2  boLa class II histocompatibility antigen, DQB*0101 beta chain precursor

    See identical proteins and their annotated locations for NP_001029840.2

    Status: PROVISIONAL

    Source sequence(s)
    BC102959
    UniProtKB/TrEMBL
    Q3ZC29
    Related
    ENSBTAP00000026100, ENSBTAT00000026100
    Conserved Domains (2) summary
    cd05766
    Location:129222
    IgC_MHC_II_beta; Class II major histocompatibility complex (MHC) beta chain immunoglobulin domain
    pfam00969
    Location:45116
    MHC_II_beta; Class II histocompatibility antigen, beta domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1.1 Primary Assembly

Genomic

  1. AC_000180.1 Reference Bos_taurus_UMD_3.1.1 Primary Assembly

    Range
    25855145..25863045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Btau_4.6.1

Genomic

  1. NC_007324.5 Alternate Btau_4.6.1

    Range
    26092957..26100872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)