These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_032242.3 → NP_115618.3 plexin-A1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC011199, AI472001
- Consensus CDS
-
CCDS33847.2
- UniProtKB/Swiss-Prot
-
Q9UIW2
- Related
- ENSP00000377061, OTTHUMP00000215966, ENST00000393409, OTTHUMT00000356451
- Conserved Domains (8) summary
-
- cd01179
Location:961 – 1046
Blast Score: 299
- IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01180
Location:864 – 960
Blast Score: 301
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01181
Location:1048 – 1148
Blast Score: 291
- IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam08337
Location:1317 – 1866
Blast Score: 2416
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- smart00630
Location:51 – 487
Blast Score: 691
- Sema; semaphorin domain
- cd11271
Location:38 – 513
Blast Score: 2421
- Sema_plexin_A1; The Sema domain, a protein interacting module, of Plexin A1
- cl02601
Location:514 – 553
Blast Score: 157
- PSI; Plexin repeat
- cl15674
Location:1150 – 1232
Blast Score: 105
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000003.11 Reference GRCh37.p5 Primary Assembly
- Range
- 126707437..126756235
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000135.1 Alternate HuRef
- Range
- 124086407..124135205
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)