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    Dip3 Dorsal interacting protein 3 [ Drosophila melanogaster ]

    Gene ID: 53579, updated on 10-May-2012
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    Summary

    Official Symbol
    Dip3provided by Flybase
    Official Full Name
    Dorsal interacting protein 3provided by Flybase
    Primary source
    FLYBASE:FBgn0040465
    Locus tag
    Dmel_CG12767
    Gene type
    protein coding
    RNA name
    dorsal interacting protein 3
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.169; CG12767; dip3; Dmel\CG12767
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    Genomic context

    Location :
    55B7-55B7
    Sequence :
    Chromosome: 2R; NT_033778.3 (14016005..14017751)
    See Dip3 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene staufen Neighboring gene Serine protease inhibitor 6 Neighboring gene Heat shock factor Neighboring gene Polycomblike

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Drosophila RB proteins repress differentiation-specific genes via two different mechanisms. Lee H, et al. Mol Cell Biol, 2010 May. PMID 20176807.
    2. Non-cell-autonomous inhibition of photoreceptor development by Dip3. Duong HA, et al. Dev Biol, 2008 Nov 1. PMID 18761008.
    3. Dorsal interacting protein 3 potentiates activation by Drosophila Rel homology domain proteins. Ratnaparkhi GS, et al. Dev Comp Immunol, 2008. PMID 18538389.
    4. Transformation of eye to antenna by misexpression of a single gene. Duong HA, et al. Mech Dev, 2008 Jan-Feb. PMID 18037276.
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Dip3 may render dorsoventral patterning more robust
      Title: Dorsal interacting protein 3 potentiates activation by Drosophila Rel homology domain proteins.
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_525003.2 NP_724052.1 dl    BIND  PubMed dl interacts with Dip3. 
    BioGRID:72803 BioGRID:64809 CG10943    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:64730 CG17154    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:66478 CG4820    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:58903 CG8924    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:72803 Dip3    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:64104 DnaJ-1    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:58646 Fer3HCH    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:59710 RpS21    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:57861 VhaAC39-1    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:61043 dl    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:62602 inaC    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:72787 krz    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:59482 lwr    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:65883 rev7    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:62657 robl    BioGRID  PubMed Two-hybrid 
    BioGRID:72803 BioGRID:77953 scaf6    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    DNA binding NAS
    Non-traceable Author Statement
    more info
    		  
    basal RNA polymerase II transcription machinery binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    sequence-specific DNA binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    sequence-specific DNA binding transcription factor activity NAS
    Non-traceable Author Statement
    more info
    		  
    transcription coactivator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    antennal development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    negative regulation of compound eye photoreceptor development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    negative regulation of eye photoreceptor cell development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    positive regulation of transcription from RNA polymerase II promoter IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    positive regulation of transcription, DNA-dependent NAS
    Non-traceable Author Statement
    more info
    		  
    regulation of transcription, DNA-dependent IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    nuclear body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus NAS
    Non-traceable Author Statement
    more info
    		  
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    General protein information

    Preferred Names
    CG12767 gene product from transcript CG12767-RA
    Names
    CG12767-PA
    Dip3-PA
    dorsal interacting protein 3
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      14016005..14017751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080264.3 → NP_525003.2  dorsal interacting protein 3 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JZD5
      Related
      FBpp0085913, FBtr0086734
      Conserved Domains (2) summary
      pfam02944
      Location:306 – 342
      Blast Score: 96
      BESS; BESS motif
      cl15779
      Location:34 – 118
      Blast Score: 221
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF57750.1
    mRNA AY071378.1 AAL49000.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V8C0.1 GenPept
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    Additional Links

    Gene LinkOut

      Supplemental Content