ndk nucleoside diphosphate kinase [Pseudomonas aeruginosa PA7] - Gene

Summary

Go to the top of the page Help

Gene symbol: ndk
Gene description: nucleoside diphosphate kinase
Locus tag: PSPA7_1307
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pseudomonas aeruginosa PA7 (strain: PA7, other: bacterial strain PA7 was obtained from Paul Roy, University of Laval, Quebec, Canada)
Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

Genomic context

Go to the top of the page Help

Sequence :: NC_009656.1 (1319816..1320247)

NC_009656.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from BioSystems

Go to the top of the page Help

Adenine ribonucleotide biosynthesis, IMP => ADP,ATP, organism-specific biosystem (from KEGG)
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Purine metabolism
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP, conserved biosystem (from KEGG)
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Purine metabolism
Biosynthesis of secondary metabolites, organism-specific biosystem (from KEGG)
Biosynthesis of secondary metabolites, organism-specific biosystem
Biosynthesis of secondary metabolites
Guanine ribonucleotide biosynthesis IMP => GDP,GTP, organism-specific biosystem (from KEGG)
Guanine ribonucleotide biosynthesis IMP => GDP,GTP, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Purine metabolism
Guanine ribonucleotide biosynthesis IMP => GDP,GTP, conserved biosystem (from KEGG)
Guanine ribonucleotide biosynthesis IMP => GDP,GTP, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Purine metabolism
Purine metabolism, organism-specific biosystem (from KEGG)
Purine metabolism, organism-specific biosystem
Purine metabolism
Purine metabolism, conserved biosystem (from KEGG)
Purine metabolism, conserved biosystem
Purine metabolism
Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP, organism-specific biosystem (from KEGG)
Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Pyrimidine metabolism
Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP, conserved biosystem (from KEGG)
Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Pyrimidine metabolism
Pyrimidine metabolism, organism-specific biosystem (from KEGG)
Pyrimidine metabolism, organism-specific biosystem
Pyrimidine metabolism
Pyrimidine metabolism, conserved biosystem (from KEGG)
Pyrimidine metabolism, conserved biosystem
Pyrimidine metabolism
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP, organism-specific biosystem (from KEGG)
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP, organism-specific biosystemPathway module; Nucleotide and amino acid metabolism; Pyrimidine metabolism
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP, conserved biosystem (from KEGG)
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP, conserved biosystemPathway module; Nucleotide and amino acid metabolism; Pyrimidine metabolism

General gene information

Go to the top of the page Help

General protein information

Go to the top of the page Help

Names: nucleoside diphosphate kinase

YP_001346691.1

Annotation generated by automatically transferring the annotation from the manually curated GenBank accession AE004091; identified by match to protein family HMM PF00334

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_009656.1

Range

1319816..1320247

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

YP_001346691.1 nucleoside diphosphate kinase [Pseudomonas aeruginosa PA7]

Status: PROVISIONAL

UniProtKB/Swiss-Prot

A6V0V6

Conserved Domains (1) summary

cd04413
Location:4 – 133
Blast Score: 604

NDPk_I; Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside ...