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lectin-30A [ Drosophila melanogaster (fruit fly) ]

Gene ID: 53541, updated on 4-Apr-2024

Summary

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Official Symbol
lectin-30Aprovided by FlyBase
Primary source
FLYBASE:FBgn0040097
Locus tag
Dmel_CG17011
See related
AllianceGenome:FB:FBgn0040097
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AC 005889A; AC005889a; CG17011; Dmel\CG17011; Lectin-30A; Lectin30A
Summary
Predicted to enable galactose binding activity and signaling receptor activity. Involved in multicellular organism reproduction. Located in extracellular space. Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
30A6-30A7; 2-35 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9254076..9254854, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9254076..9254854, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene borealin-related Neighboring gene G protein gamma subunit 30A Neighboring gene long non-coding RNA:CR45262 Neighboring gene long non-coding RNA:CR42844

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A dual role of lola in Drosophila ovary development: regulating stem cell niche establishment and repressing apoptosis. Zhao T, et al. Cell Death Dis, 2022 Sep 2. PMID 36056003, Free PMC Article
  2. Nonadaptive molecular evolution of seminal fluid proteins in Drosophila. Patlar B, et al. Evolution, 2021 Aug. PMID 34184267, Free PMC Article
  3. Molecular evolution and population genetics of duplicated accessory gland protein genes in Drosophila. Holloway AK, et al. Mol Biol Evol, 2004 Sep. PMID 15215320
  4. Lectin-like proteins in model organisms: implications for evolution of carbohydrate-binding activity. Dodd RB, et al. Glycobiology, 2001 May. PMID 11425795
  5. Insect glycobiology: a lectin multigene family in Drosophila melanogaster. Theopold U, et al. Biochem Biophys Res Commun, 1999 Aug 11. PMID 10441526

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables carbohydrate binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables galactose binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in sexual reproduction HEP PubMed 
Component Evidence Code Pubs
located_in extracellular space HDA PubMed 

General protein information

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Preferred Names
lectin-30A
Names
CG17011-PA
Lectin30A
lectin-30A-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9254076..9254854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_144378.4 → NP_652635.2  lectin-30A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652635.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6GV01, Q6GV06, Q9VLD5
    Conserved Domains (1) summary
    cd00037
    Location:118 → 218
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GV01 Q6GV01
Q6GV06 Q6GV06

Gene LinkOut

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