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PQBP1 polyglutamine binding protein 1 [ Bos taurus (cattle) ]

Gene ID: 534894, updated on 4-Sep-2014
Official Symbol
PQBP1
Official Full Name
polyglutamine binding protein 1
Locus tag
BOS_25938
See related
BGD:BT27476; Ensembl:ENSBTAG00000018498
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
See PQBP1 in MapViewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Bos_taurus_UMD_3.1 (GCF_000003055.4) X AC_000187.1 (92092315..92098102)

Chromosome X - AC_000187.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 1 inhibitor Neighboring gene translocase of inner mitochondrial membrane 17 homolog B (yeast) Neighboring gene solute carrier family 35 (UDP-galactose transporter), member A2 Neighboring gene pim-2 oncogene

  • Spliceosome, organism-specific biosystem (from KEGG)
    Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • Spliceosome, conserved biosystem (from KEGG)
    Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • Spliceosome, Prp19/CDC5L complex, organism-specific biosystem (from KEGG)
    Spliceosome, Prp19/CDC5L complex, organism-specific biosystemStructural complex; Genetic information processing; Spliceosome
  • Spliceosome, Prp19/CDC5L complex, conserved biosystem (from KEGG)
    Spliceosome, Prp19/CDC5L complex, conserved biosystemStructural complex; Genetic information processing; Spliceosome

Homology

Clone Names

  • MGC129091

Gene Ontology Provided by GOA

Function Evidence Code Pubs
ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
alternative mRNA splicing, via spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
 
neuron projection development ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 
regulation of dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
stress granule assembly IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 
neuronal ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 
nuclear speck ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
polyglutamine-binding protein 1
Names
polyglutamine-binding protein 1
PQBP-1
polyglutamine tract-binding protein 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046389.1NP_001039854.1  polyglutamine-binding protein 1

    See proteins identical to NP_001039854.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105573
    UniProtKB/Swiss-Prot
    Q2HJC9
    Related
    ENSBTAP00000024621, ENSBTAT00000024621
    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1 Primary Assembly

Genomic

  1. AC_000187.1 

    Range
    92092315..92098102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005228145.1XP_005228202.1  

    See proteins identical to XP_005228202.1

    UniProtKB/Swiss-Prot
    Q2HJC9
    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  2. XM_005228151.1XP_005228208.1  

    See proteins identical to XP_005228208.1

    UniProtKB/Swiss-Prot
    Q2HJC9
    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  3. XM_005228148.1XP_005228205.1  

    See proteins identical to XP_005228205.1

    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  4. XM_005228146.1XP_005228203.1  

    See proteins identical to XP_005228203.1

    UniProtKB/Swiss-Prot
    Q2HJC9
    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  5. XM_005228149.1XP_005228206.1  

    See proteins identical to XP_005228206.1

    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  6. XM_005228150.1XP_005228207.1  

    See proteins identical to XP_005228207.1

    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues
  7. XM_005228147.1XP_005228204.1  

    See proteins identical to XP_005228204.1

    UniProtKB/Swiss-Prot
    Q2HJC9
    Conserved Domains (1) summary
    smart00456
    Location:4778
    WW; Domain with 2 conserved Trp (W) residues

Alternate Btau_4.6.1

Genomic

  1. NC_007331.4 

    Range
    55588255..55593996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)