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GRIA3 glutamate ionotropic receptor AMPA type subunit 3 [ Bos taurus (cattle) ]

Gene ID: 534626, updated on 5-Mar-2024

Summary

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Official Symbol
GRIA3provided by VGNC
Official Full Name
glutamate ionotropic receptor AMPA type subunit 3provided by VGNC
Primary source
VGNC:VGNC:29640
See related
BGD:BT29789; Ensembl:ENSBTAG00000011833
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (7567764..7876396)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene mRNA export factor-like Neighboring gene microRNA mir-2285bj-1 Neighboring gene tyrosine-protein kinase Fer-like Neighboring gene U6 spliceosomal RNA Neighboring gene THO complex subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMPA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor 3
Names
glutamate receptor, ionotrophic, AMPA 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206059.1 → NP_001192988.1  glutamate receptor 3 precursor

    See identical proteins and their annotated locations for NP_001192988.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000030
    UniProtKB/TrEMBL
    A0A3Q1LQB5
    Related
    ENSBTAP00000059258.1, ENSBTAT00000073460.1
    Conserved Domains (2) summary
    cd13715
    Location:422 → 805
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06387
    Location:35 → 409
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    7567764..7876396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010821371.4 → XP_010819673.1  glutamate receptor 3 isoform X2

    See identical proteins and their annotated locations for XP_010819673.1

    UniProtKB/TrEMBL
    A0A3Q1LQB5
    Conserved Domains (2) summary
    cd13715
    Location:422 → 805
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06387
    Location:35 → 409
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor

  2. XM_005227468.5 → XP_005227525.1  glutamate receptor 3 isoform X2

    See identical proteins and their annotated locations for XP_005227525.1

    UniProtKB/TrEMBL
    A0A3Q1LQB5
    Conserved Domains (2) summary
    cd13715
    Location:422 → 805
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06387
    Location:35 → 409
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor

  3. XM_005227469.5 → XP_005227526.1  glutamate receptor 3 isoform X1

    See identical proteins and their annotated locations for XP_005227526.1

    UniProtKB/TrEMBL
    E1BGZ0
    Related
    ENSBTAP00000015717.6, ENSBTAT00000015717.7
    Conserved Domains (2) summary
    cd13715
    Location:422 → 805
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06387
    Location:35 → 409
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor

  4. XM_059883481.1 → XP_059739464.1  glutamate receptor 3 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LJY5

  5. XM_010821372.3 → XP_010819674.1  glutamate receptor 3 isoform X2

    See identical proteins and their annotated locations for XP_010819674.1

    UniProtKB/TrEMBL
    A0A3Q1LQB5
    Conserved Domains (2) summary
    cd13715
    Location:422 → 805
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    cd06387
    Location:35 → 409
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor
Nucleotide Protein Strain
Heading Accession and Version

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