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CREB5 cAMP responsive element binding protein 5 [ Bos taurus (cattle) ]

Gene ID: 534129, updated on 3-Apr-2024

Summary

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Official Symbol
CREB5provided by VGNC
Official Full Name
cAMP responsive element binding protein 5provided by VGNC
Primary source
VGNC:VGNC:106699
See related
BGD:BT24133; Ensembl:ENSBTAG00000018909
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (67314284..67752288, complement)

Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase vitellogenic like Neighboring gene TLR4 interactor with leucine rich repeats Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene uncharacterized LOC132345110 Neighboring gene JAZF zinc finger 1 Neighboring gene EEF1A lysine methyltransferase 2-like Neighboring gene Tax1 binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Creb5 establishes the competence for Prg4 expression in articular cartilage. Zhang CH, et al. Commun Biol, 2021 Mar 12. PMID 33712729, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Creb5 establishes the competence for Prg4 expression in articular cartilage.
    Title: Creb5 establishes the competence for Prg4 expression in articular cartilage.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cAMP response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-responsive element-binding protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001319882.1 → NP_001306811.1  cyclic AMP-responsive element-binding protein 5

    Status: PROVISIONAL

    Source sequence(s)
    KR815996
    UniProtKB/TrEMBL
    A0A0S1RVU4, A0A3Q1M7T1
    Related
    ENSBTAP00000064438.2, ENSBTAT00000068556.2
    Conserved Domains (1) summary
    cd14687
    Location:377 → 436
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    67314284..67752288 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024990748.2 → XP_024846516.1  cyclic AMP-responsive element-binding protein 5 isoform X8

    UniProtKB/TrEMBL
    A0A3Q1MUD0
    Conserved Domains (1) summary
    cd14687
    Location:333 → 392
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

  2. XM_059885640.1 → XP_059741623.1  cyclic AMP-responsive element-binding protein 5 isoform X7

  3. XM_024990747.2 → XP_024846515.1  cyclic AMP-responsive element-binding protein 5 isoform X4

    UniProtKB/TrEMBL
    A0A3Q1M7T1, E1BED4
    Related
    ENSBTAP00000069073.1, ENSBTAT00000084350.2
    Conserved Domains (1) summary
    cd14687
    Location:370 → 429
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

  4. XM_015469831.3 → XP_015325317.2  cyclic AMP-responsive element-binding protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1M7T1
    Conserved Domains (1) summary
    cd14687
    Location:371 → 430
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

  5. XM_059885639.1 → XP_059741622.1  cyclic AMP-responsive element-binding protein 5 isoform X6

  6. XM_059885637.1 → XP_059741620.1  cyclic AMP-responsive element-binding protein 5 isoform X2

  7. XM_059885636.1 → XP_059741619.1  cyclic AMP-responsive element-binding protein 5 isoform X1

  8. XM_059885638.1 → XP_059741621.1  cyclic AMP-responsive element-binding protein 5 isoform X5

  9. XM_003585978.6 → XP_003586026.2  cyclic AMP-responsive element-binding protein 5 isoform X9

    UniProtKB/TrEMBL
    E1BGJ1
    Related
    ENSBTAP00000099857.1, ENSBTAT00000121231.1
    Conserved Domains (1) summary
    cd14687
    Location:238 → 297
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

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