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    PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 [ Bos taurus (cattle) ]

    Gene ID: 533859, updated on 24-May-2013
    Symbol
    PITPNM1
    Full Name
    phosphatidylinositol transfer protein, membrane-associated 1
    Locus tag
    BOS_24898
    See related
    BGD:BT20917; Ensembl:ENSBTAG00000010482
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Location :
    chromosome: 29
    Sequence :
    Chromosome: 29; AC_000186.1 (46018732..46032336, complement)
    See PITPNM1 in MapViewer

    Chromosome 29 - AC_000186.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 134 Neighboring gene aryl hydrocarbon receptor interacting protein Neighboring gene cyclin-dependent kinase 2 associated protein 2 Neighboring gene calcium binding protein 2

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038.

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Markers

    Genotypes

    Homology

    Preferred Names
    membrane-associated phosphatidylinositol transfer protein 1
    Names
    phosphatidylinositol transfer protein, membrane-associated 1

    RefSeqs of Annotated Genomes: Build 6.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_taurus_UMD_3.1 Primary Assembly

    Genomic

    1. AC_000186.1

      Range
      46018732..46032336, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002699366.1 → XP_002699412.1  

      Related
      ENSBTAP00000013851, ENSBTAT00000013851
      Conserved Domains (4) summary
      cd01427
      Location:1026 – 1150
      Blast Score: 104
      HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
      pfam08235
      Location:1027 – 1157
      Blast Score: 470
      LNS2; LNS2 (Lipin/Ned1/Smp2)
      cd08889
      Location:1 – 257
      Blast Score: 1376
      SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
      pfam02862
      Location:688 – 876
      Blast Score: 434
      DDHD; DDHD domain

    Alternate Btau_4.6.1

    Genomic

    1. NC_007330.5

      Range
      47143155..47156529, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_613401.6 → XP_613401.5  

      Conserved Domains (4) summary
      cd01427
      Location:1026 – 1150
      Blast Score: 104
      HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
      pfam08235
      Location:1027 – 1157
      Blast Score: 470
      LNS2; LNS2 (Lipin/Ned1/Smp2)
      cd08889
      Location:1 – 257
      Blast Score: 1376
      SRPBCC_PITPNM1-2_like; Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)
      pfam02862
      Location:688 – 876
      Blast Score: 434
      DDHD; DDHD domain
    Nucleotide Protein Strain
    Heading Accession and Version
    genomic AAFC02150348.1 None
    genomic AAFC03014335.1 None
    genomic AAFC03062287.1 (75128..84981) None
    genomic DAAA02063624.1 (2601..5584) None
    genomic DAAA02063625.1 None
    genomic GJ063043.1 DAA13646.1 Hereford

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • HomoloGene
        Links between HomoloGene and Gene are provided by the HomoloGene group when a gene is included in a HomoloGene record.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • SNP
        Related SNP records
      • SNP: GeneView
        SNPs linked from GeneView
      • SNP: Genotype
        Gene Genotype Report
      • Taxonomy
        Link to related taxonomy entry
      • UniSTS
        Related UniSTS records

      Links to other resources

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