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BDI_3550 DNA gyrase subunit B [ Parabacteroides distasonis ATCC 8503 ]

Gene ID: 5308699, updated on 22-Mar-2014
Gene symbol
BDI_3550
Gene description
DNA gyrase subunit B
Locus tag
BDI_3550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Parabacteroides distasonis ATCC 8503 (strain: ATCC 8503)
Lineage
Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides
Sequence :
NC_009615.1 (4346646..4348601, complement)

NC_009615.1Genomic Context describing neighboring genes Neighboring gene leucine aminopeptidase Neighboring gene glutamine amidotransferase Neighboring gene glutamine amidotransferase Neighboring gene tRNA Neighboring gene 30S ribosomal protein S20

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009615.1

    Range
    4346646..4348601, complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001304873.1 DNA gyrase subunit B [Parabacteroides distasonis ATCC 8503]

    See proteins identical to YP_001304873.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6LHT7
    Conserved Domains (5) summary
    PRK05644
    Location:7651
    Blast Score: 3286
    gyrB; DNA gyrase subunit B; Validated
    cd00075
    Location:42177
    Blast Score: 161
    HATPase_c; Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins
    cd00822
    Location:232402
    Blast Score: 694
    TopoII_Trans_DNA_gyrase; TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are ...
    pfam00986
    Location:582641
    Blast Score: 308
    DNA_gyraseB_C; DNA gyrase B subunit, carboxyl terminus
    cl00718
    Location:429547
    Blast Score: 568
    TOPRIM; Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA, type IIA and type IIB topoisomerases, bacterial DnaG-type primases, small primase-like proteins from bacteria and archaea, OLD family nucleases from ...

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