These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_023296.1 RefSeqGene
- Range
- 5001..14605
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001131064.1 → NP_001124536.1 lysosomal acid phosphatase isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant uses a different splice site in the 3' coding region and is much shorter, compared to variant 1. The predicted protein (isoform 2) has a shorter and distinct C-terminus when it is compared to isoform 1.
- Source sequence(s)
-
DA382854, DC337294
- Consensus CDS
-
CCDS44583.1
- UniProtKB/TrEMBL
-
E9PCI1
- Related
- ENSP00000414911, OTTHUMP00000234587, ENST00000444355, OTTHUMT00000392162
- Conserved Domains (1) summary
-
- cd07061
Location:33 – 151
Blast Score: 278
- HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction.
-
NM_001610.2 → NP_001601.1 lysosomal acid phosphatase isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and it encodes the longer protein (isoform 1).
- Source sequence(s)
-
BC003160, BC093010, DC337294
- Consensus CDS
-
CCDS7928.1
- UniProtKB/Swiss-Prot
-
P11117
- Related
- ENSP00000256997, OTTHUMP00000234497, ENST00000256997, OTTHUMT00000392022
- Conserved Domains (1) summary
-
- cd07061
Location:33 – 330
Blast Score: 388
- HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000011.9 Reference GRCh37.p5 Primary Assembly
- Range
- 47260853..47270457, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000143.1 Alternate HuRef
- Range
- 46959833..46969437, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)