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SNX3 sorting nexin 3 [ Bos taurus (cattle) ]

Gene ID: 528265, updated on 13-Apr-2024

Summary

Official Symbol
SNX3provided by VGNC
Official Full Name
sorting nexin 3provided by VGNC
Primary source
VGNC:VGNC:35107
See related
BGD:BT25454; Ensembl:ENSBTAG00000018801
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (41870929..41918141)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene AFG1 like ATPase Neighboring gene ribosomal protein S4 X-linked pseudogene Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene nuclear receptor subfamily 2 group E member 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in late endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079778.1NP_001073246.1  sorting nexin-3

    See identical proteins and their annotated locations for NP_001073246.1

    Status: PROVISIONAL

    Source sequence(s)
    BC114888
    UniProtKB/Swiss-Prot
    Q1RMH8
    Related
    ENSBTAP00000025026.3, ENSBTAT00000025026.4
    Conserved Domains (1) summary
    cd07293
    Location:28150
    PX_SNX3; The phosphoinositide binding Phox Homology domain of Sorting Nexin 3

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    41870929..41918141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059889737.1XP_059745720.1  sorting nexin-3 isoform X1