Format

Send to:

Choose Destination

Ramp1 receptor (calcitonin) activity modifying protein 1 [ Mus musculus (house mouse) ]

Gene ID: 51801, updated on 28-May-2016
Official Symbol
Ramp1provided by MGI
Official Full Name
receptor (calcitonin) activity modifying protein 1provided by MGI
Primary source
MGI:MGI:1858418
See related
Ensembl:ENSMUSG00000034353 Vega:OTTMUSG00000048487
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9130218E19Rik
Orthologs
Location:
1 D; 1 46.08 cM
Exon count:
7
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 1 NC_000067.6 (91179822..91225196)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (93076399..93121773)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 35443 Neighboring gene RNA binding motif protein 44 Neighboring gene proteasome (prosome, macropain) 28 subunit, alpha pseudogene Neighboring gene ubiquitin-conjugating enzyme E2F (putative) Neighboring gene zinc finger protein 330 pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Homology

Clone Names

  • MGC38240

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcitonin receptor activity ISO
Inferred from Sequence Orthology
more info
 
calcitonin receptor binding ISO
Inferred from Sequence Orthology
more info
 
coreceptor activity IDA
Inferred from Direct Assay
more info
PubMed 
coreceptor activity ISO
Inferred from Sequence Orthology
more info
 
protein transporter activity ISO
Inferred from Sequence Orthology
more info
 
receptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
G-protein coupled receptor signaling pathway IPI
Inferred from Physical Interaction
more info
PubMed 
angiogenesis ISO
Inferred from Sequence Orthology
more info
 
calcium ion transport ISO
Inferred from Sequence Orthology
more info
 
intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
positive regulation of cAMP biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
positive regulation of protein glycosylation ISO
Inferred from Sequence Orthology
more info
 
protein localization to plasma membrane ISO
Inferred from Sequence Orthology
more info
 
protein transport ISO
Inferred from Sequence Orthology
more info
 
receptor internalization ISO
Inferred from Sequence Orthology
more info
 
regulation of G-protein coupled receptor protein signaling pathway ISO
Inferred from Sequence Orthology
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell surface ISO
Inferred from Sequence Orthology
more info
 
extracellular space ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
colocalizes_with plasma membrane ISO
Inferred from Sequence Orthology
more info
 
receptor complex ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
receptor activity-modifying protein 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001168392.1NP_001161864.1  receptor activity-modifying protein 1 isoform 3 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 3' UTR and coding region compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC102874, BY707433, CB522711
    Consensus CDS
    CCDS48321.1
    UniProtKB/TrEMBL
    A0A087WPC6
    Related
    ENSMUSP00000139720, OTTMUSP00000067651, ENSMUST00000188475, OTTMUST00000124271
    Conserved Domains (1) summary
    pfam04901
    Location:3464
    RAMP; Receptor activity modifying family
  2. NM_016894.3NP_058590.1  receptor activity-modifying protein 1 isoform 1 precursor

    See identical proteins and their annotated locations for NP_058590.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AC102874, AK165238, BY733497
    Consensus CDS
    CCDS15158.1
    UniProtKB/Swiss-Prot
    Q9WTJ5
    UniProtKB/TrEMBL
    Q3TNJ3
    Related
    ENSMUSP00000095253, OTTMUSP00000067652, ENSMUST00000097648, OTTMUST00000124272
    Conserved Domains (1) summary
    pfam04901
    Location:34148
    RAMP; Receptor activity modifying family
  3. NM_178401.3NP_848488.2  receptor activity-modifying protein 1 isoform 2 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has an alternate 3' exon, as compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus, as compared to isoform 1.
    Source sequence(s)
    BY733497, CB522711
    Consensus CDS
    CCDS78648.1
    UniProtKB/TrEMBL
    E9Q915
    Related
    ENSMUSP00000128679, OTTMUSP00000067650, ENSMUST00000165855, OTTMUST00000124270
    Conserved Domains (1) summary
    pfam04901
    Location:3464
    RAMP; Receptor activity modifying family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p3 C57BL/6J

    Range
    91179822..91225196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006529747.2XP_006529810.1  

    Conserved Domains (1) summary
    pfam04901
    Location:12126
    RAMP; Receptor activity modifying family
  2. XM_011248050.1XP_011246352.1  

    Conserved Domains (1) summary
    pfam04901
    Location:18132
    RAMP; Receptor activity modifying family

Alternate Mm_Celera

Genomic

  1. AC_000023.1 Alternate Mm_Celera

    Range
    94117772..94162742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)