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CMM_1417 short chain dehydrogenase [ Clavibacter michiganensis subsp. michiganensis NCPPB 382 ]

Gene ID: 5173355, updated on 6-Jul-2014
Gene symbol
CMM_1417
Gene description
short chain dehydrogenase
Locus tag
CMM_1417
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Clavibacter michiganensis subsp. michiganensis NCPPB 382 (strain: NCPPB 382, sub-species: michiganensis)
Lineage
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Clavibacter
Sequence:
NC_009480.1 (1607519..1608517, complement)

NC_009480.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative dehydrogenase Neighboring gene long-chain-fatty-acid--CoA ligase Neighboring gene putative short chain dehydrogenase/oxidoreductase

Names
short chain dehydrogenase
YP_001222158.1
  • putative short-chain dehydrogenase (ZP_00228984.1| COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Kineococcus radiotolerans SRS30216]; ZP_00107839.1| COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Nostoc punctiforme]; CAB76332.1| putative oxidoreductase. [Streptomyces coelicolor A3(2)]). pfam00106, adh_short,short chain dehydrogenase. This family contains a wide variety of dehydrogenases. InterPro: Short-chain dehydrogenase/reductase (SDR) superfamily.~Function unclear

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009480.1 

    Range
    1607519..1608517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001222158.1 short chain dehydrogenase [Clavibacter michiganensis subsp. michiganensis NCPPB 382]

    See proteins identical to YP_001222158.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A5CQV8
    Conserved Domains (2) summary
    PRK07109
    Location:1332
    Blast Score: 1168
    PRK07109; short chain dehydrogenase; Provisional
    cl09931
    Location:4236
    Blast Score: 660
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins