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PUS1 pseudouridine synthase 1 [ Bos taurus (cattle) ]

Gene ID: 515808, updated on 5-Mar-2024

Summary

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Official Symbol
PUS1provided by VGNC
Official Full Name
pseudouridine synthase 1provided by VGNC
Primary source
VGNC:VGNC:33574
See related
BGD:BT18675; Ensembl:ENSBTAG00000012990
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (45162665..45173070, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene E1A binding protein p400 Neighboring gene microRNA mir-6520 Neighboring gene uncharacterized LOC112442032 Neighboring gene unc-51 like autophagy activating kinase 1 Neighboring gene matrix metallopeptidase 17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA pseudouridine synthase A; pseudouridylate synthase 1 homolog
Names
pseudouridylate synthase 1
XP_002694500.1
XP_005217769.1
XP_010812169.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    45162665..45173070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005217712.5 → XP_005217769.1  pseudouridylate synthase 1 homolog isoform X2

    See identical proteins and their annotated locations for XP_005217769.1

    UniProtKB/TrEMBL
    A0A3Q1LWZ6
    Related
    ENSBTAP00000100676.1, ENSBTAT00000087579.1
    Conserved Domains (1) summary
    cd02568
    Location:61 → 313
    PseudoU_synth_PUS1_PUS2; Pseudouridine synthase, PUS1/ PUS2 like

  2. XM_010813867.4 → XP_010812169.1  pseudouridylate synthase 1 homolog isoform X2

    See identical proteins and their annotated locations for XP_010812169.1

    UniProtKB/TrEMBL
    A0A3Q1LWZ6
    Related
    ENSBTAP00000061734.2, ENSBTAT00000071667.2
    Conserved Domains (1) summary
    cd02568
    Location:61 → 313
    PseudoU_synth_PUS1_PUS2; Pseudouridine synthase, PUS1/ PUS2 like

  3. XM_002694454.6 → XP_002694500.1  pseudouridylate synthase 1 homolog isoform X1

    See identical proteins and their annotated locations for XP_002694500.1

    UniProtKB/TrEMBL
    E1BDL3
    Related
    ENSBTAP00000017270.5, ENSBTAT00000017270.7
    Conserved Domains (1) summary
    cd02568
    Location:94 → 346
    PseudoU_synth_PUS1_PUS2; Pseudouridine synthase, PUS1/ PUS2 like
Nucleotide Protein Strain
Heading Accession and Version

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