These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001199261.1 → NP_001186190.1 ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The resulting isoform (2) lacks one internal residue, compared to isoform 1.
- Source sequence(s)
-
AL136370, BC015521, DA255130
- Consensus CDS
-
CCDS55668.1
- UniProtKB/Swiss-Prot
-
Q9Y5K5
- Related
- ENSP00000356424, OTTHUMP00000033566, ENST00000367454, OTTHUMT00000086319
- Conserved Domains (1) summary
-
- cd02255
Location:8 – 223
Blast Score: 1048
- Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
-
NM_001199262.1 → NP_001186191.1 ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the central coding region and uses a distinct splice pattern in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (3) lacks one internal residue and has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC025369, DA255130
- Consensus CDS
-
CCDS55670.1
- UniProtKB/Swiss-Prot
-
Q9Y5K5
- Related
- ENSP00000356418, OTTHUMP00000033568, ENST00000367448, OTTHUMT00000086321
- Conserved Domains (1) summary
-
- cd02255
Location:8 – 223
Blast Score: 1046
- Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
-
NM_001199263.1 → NP_001186192.1 ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the central coding region and uses a distinct splice pattern in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (4) lacks one internal residue and has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AF151828, BC025369, DA255130
- Consensus CDS
-
CCDS55669.1
- UniProtKB/Swiss-Prot
-
Q9Y5K5
- Related
- ENSP00000356419, OTTHUMP00000033567, ENST00000367449, OTTHUMT00000086320
- Conserved Domains (1) summary
-
- cd02255
Location:8 – 223
Blast Score: 1047
- Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
-
NM_015984.3 → NP_057068.1 ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF147717, AL136370, DA255130
- Consensus CDS
-
CCDS1378.1
- UniProtKB/Swiss-Prot
-
Q9Y5K5
- Related
- ENSP00000356425, OTTHUMP00000033565, ENST00000367455, OTTHUMT00000086318
- Conserved Domains (1) summary
-
- cd02255
Location:8 – 223
Blast Score: 1046
- Peptidase_C12; Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and BAP1
RNA
-
NR_037607.1 RNA Sequence
- Description
- Transcript Variant: This variant (5) uses an alternate 5' exon and differs at an internal splice site and at the 3' end, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK301381, BI548319
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000001.10 Reference GRCh37.p5 Primary Assembly
- Range
- 192981496..193029237, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000133.1 Alternate HuRef
- Range
- 164217286..164265038, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)