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    pyrC dihydroorotase [ Vibrio cholerae O395 ]

    Gene ID: 5134847, updated on 8-May-2013
    Gene symbol
    pyrC
    Gene description
    dihydroorotase
    Locus tag
    VC0395_0313
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Vibrio cholerae O395 (strain: O395, serotype: O1, biotype: Ogawa)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Location :
    chromosome: 1
    Sequence :
    Chromosome: 1; NC_009456.1 (345236..346288, complement)

    Chromosome 1 - NC_009456.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene AraC/XylS family transcriptional regulator Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A recalibrated molecular clock and independent origins for the cholera pandemic clones. Feng L, et al. PLoS One, 2008. PMID 19115014.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    dihydroorotase
    YP_001215154.1
    • catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009456.1

      Range
      345236..346288, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001215154.1 dihydroorotase [Vibrio cholerae O395]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A5F0T1
      Conserved Domains (1) summary
      cd01294
      Location:12 – 347
      Blast Score: 1288
      DHOase; Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001236.1 ACP11781.1
    genomic CP000626.1 ABQ18361.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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