These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_009101.1 RefSeqGene
- Range
- 5001..22542
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_002597.3 → NP_002588.3 phosducin isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), also known as PHD, represents the longer transcript, and encodes the longer isoform (a).
- Source sequence(s)
-
AF076464, BQ636049, M33478
- Consensus CDS
-
CCDS1370.1
- UniProtKB/Swiss-Prot
-
P20941
- UniProtKB/TrEMBL
-
Q9UP22
- Related
- ENSP00000375855, OTTHUMP00000033581, ENST00000391997, OTTHUMT00000086347
- Conserved Domains (1) summary
-
- cd02987
Location:14 – 225
Blast Score: 601
- Phd_like_Phd; Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes ...
-
NM_022576.3 → NP_072098.1 phosducin isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), also known as PHLOP1, has an alternate 5' sequence, resulting in a downstream AUG start codon, compared to variant 1. The resulting isoform (b) is shorter at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AF076464, BM674109
- Consensus CDS
-
CCDS41447.1
- UniProtKB/TrEMBL
-
Q9UP22
- Related
- ENSP00000422775, OTTHUMP00000217169, ENST00000497198, OTTHUMT00000086348
- Conserved Domains (1) summary
-
- cd02987
Location:10 – 173
Blast Score: 553
- Phd_like_Phd; Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000001.10 Reference GRCh37.p5 Primary Assembly
- Range
- 186412698..186430239, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000133.1 Alternate HuRef
- Range
- 157647242..157664784, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the cited
reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links,
or BLAST links (BLink), but may still be retrieved by clicking on their
accession.version below.
-
NM_022577.1: Suppressed sequence
- Description
- NM_022577.1: This RefSeq was permanently suppressed because the transcript represents a chimeric sequence with nts 1-77 aligning to chromosome 3 and 78-1421 to chromosome 1.