CRAT carnitine O-acetyltransferase [Bos taurus (cattle)] - Gene

Summary

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Symbol: CRAT
Full Name: carnitine O-acetyltransferase
Locus tag: BOS_12086
See related: BGD:BT24883; Ensembl:ENSBTAG00000001932
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos

Genomic context

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Location :: chromosome: 11

Sequence :: Chromosome: 11; AC_000168.1 (99576791..99589668, complement)

See CRAT in MapViewer

Chromosome 11 - AC_000168.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

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Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from BioSystems

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Beta-oxidation of pristanoyl-CoA, organism-specific biosystem (from REACTOME)
Beta-oxidation of pristanoyl-CoA, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Beta-oxidation of very long chain fatty acids, organism-specific biosystem (from REACTOME)
Beta-oxidation of very long chain fatty acids, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism, organism-specific biosystem (from REACTOME)
Metabolism, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism of lipids and lipoproteins, organism-specific biosystem (from REACTOME)
Metabolism of lipids and lipoproteins, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peroxisomal lipid metabolism, organism-specific biosystem (from REACTOME)
Peroxisomal lipid metabolism, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peroxisome, organism-specific biosystem (from KEGG)
Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
Peroxisome, conserved biosystem (from KEGG)
Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...

General gene information

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Markers

BARC0017 (e-PCR)
- UniSTS:255304

CRAT_4187 (e-PCR)
- UniSTS:463249

Homology

Homologs of the CRAT gene: The CRAT gene is conserved in human, chimpanzee, Rhesus monkey, dog, mouse, rat, chicken, zebrafish, fruit fly, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, and N.crassa.
OrthoDB: The Hierarchical Catalog of Eukaryotic Orthologs

General protein information

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Preferred Names: carnitine O-acetyltransferase

Names: carnitine O-acetyltransferase; carnitine acetyltransferase

NP_001069055.1

EC 2.3.1.7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001075587.1 → NP_001069055.1 carnitine O-acetyltransferase

Status: PROVISIONAL

Source sequence(s)

BC123649

UniProtKB/TrEMBL

Q08DN5

Related

ENSBTAP00000002513, ENSBTAT00000002513

Conserved Domains (1) summary

pfam00755
Location:34 – 615
Blast Score: 2158

Carn_acyltransf; Choline/Carnitine o-acyltransferase

RefSeqs of Annotated Genomes: Build 6.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1 Primary Assembly

Genomic

AC_000168.1 Reference Bos_taurus_UMD_3.1 Primary Assembly

Range

99576791..99589668, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Btau_4.6.1

Genomic

NC_007309.5 Alternate Btau_4.6.1

Range

103056933..103069810, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Nucleotide		Protein	Strain
Heading	Accession and Version	Protein	Strain
genomic	AAFC03017692.1 (27675..40552)	None
genomic	AC150677.7 (27675..40552)	None
genomic	DAAA02032204.1 (191470..204347)	None
genomic	GJ062038.1	DAA24154.1	Hereford
mRNA	BC123649.1	AAI23650.1	L1 Hereford
mRNA	BT030711.1	ABS45027.1