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    DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [ Bos taurus (cattle) ]

    Gene ID: 512470, updated on 16-Feb-2013
    Symbol
    DHX29
    Full Name
    DEAH (Asp-Glu-Ala-His) box polypeptide 29
    Locus tag
    BOS_19760
    See related
    BGD:BT11253; Ensembl:ENSBTAG00000010510
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Location :
    chromosome: 20
    Sequence :
    Chromosome: 20; AC_000177.1 (23853175..23900486)
    See DHX29 in MapViewer

    Chromosome 20 - AC_000177.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38, member 9 Neighboring gene phosphatidic acid phosphatase type 2A Neighboring gene superkiller viralicidic activity 2-like 2 (S. cerevisiae) Neighboring gene multiciliate cell differentiation 1 Neighboring gene cyclin O

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038.

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Genotypes

    Homology

    Preferred Names
    ATP-dependent RNA helicase DHX29
    Names
    ATP-dependent RNA helicase DHX29
    NP_001193063.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206134.1 → NP_001193063.1  ATP-dependent RNA helicase DHX29

      Status: PROVISIONAL

      Source sequence(s)
      DAAA02050346
      Related
      ENSBTAP00000013897, ENSBTAT00000013897
      Conserved Domains (6) summary
      cd00046
      Location:585 – 732
      Blast Score: 211
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      cd00079
      Location:858 – 989
      Blast Score: 141
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      COG1643
      Location:863 – 1282
      Blast Score: 686
      HrpA; HrpA-like helicases [DNA replication, recombination, and repair]
      pfam04408
      Location:1044 – 1135
      Blast Score: 274
      HA2; Helicase associated domain (HA2)
      pfam07717
      Location:1175 – 1298
      Blast Score: 175
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
      smart00487
      Location:562 – 760
      Blast Score: 239
      DEXDc; DEAD-like helicases superfamily

    RefSeqs of Annotated Genomes: Build 6.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_taurus_UMD_3.1 Primary Assembly

    Genomic

    1. AC_000177.1 Reference Bos_taurus_UMD_3.1 Primary Assembly

      Range
      23853175..23900486
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Btau_4.6.1

    Genomic

    1. NC_007318.5 Alternate Btau_4.6.1

      Range
      25407337..25454649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    genomic AAFC03017300.1 (3251..50563) None Hereford
    genomic DAAA02050346.1 (46101..93412) None
    genomic GJ062677.1 DAA17914.1 Hereford
    mRNA BC110134.1 AAI10135.1 mixed

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • HomoloGene
        Links between HomoloGene and Gene are provided by the HomoloGene group when a gene is included in a HomoloGene record.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • SNP
        Related SNP records
      • SNP: GeneView
        SNPs linked from GeneView
      • Taxonomy
        Link to related taxonomy entry
      • UniGene
        Links are provided between Gene and UniGene when both databases calculate links to the same mRNA record (gi).

      Links to other resources

      General information

      Related sites

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