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ACP6 acid phosphatase 6, lysophosphatidic [ Homo sapiens (human) ]

Gene ID: 51205, updated on 6-Jul-2014
Official Symbol
ACP6provided by HGNC
Official Full Name
acid phosphatase 6, lysophosphatidicprovided by HGNC
Primary source
HGNC:29609
Locus tag
UNQ205/PRO231
See related
HPRD:16472; MIM:611471
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LPAP; ACPL1; PACPL1
See ACP6 in Epigenomics, MapViewer
Location:
1q21
Exon count :
11
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 1 NC_000001.11 (147647366..147670512, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147119168..147142634, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 624 Neighboring gene olfactory receptor, family 13, subfamily Z, member 3 pseudogene Neighboring gene B-cell CLL/lymphoma 9 Neighboring gene uncharacterized LOC102723321 Neighboring gene gap junction protein, alpha 5, 40kDa Neighboring gene PRAME family member 17 pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
lysophosphatidic acid phosphatase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
dephosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
dephosphorylation IEA
Inferred from Electronic Annotation
more info
 
lysobisphosphatidic acid metabolic process IDA
Inferred from Direct Assay
more info
 
phospholipid metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
lysophosphatidic acid phosphatase type 6
Names
lysophosphatidic acid phosphatase type 6
acid phosphatase like 1
acid phosphatase-like protein 1
lysophosphatidic acid phosphatase 6
NP_057445.4

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016361.4NP_057445.4  lysophosphatidic acid phosphatase type 6 precursor

    See proteins identical to NP_057445.4

    Status: VALIDATED

    Source sequence(s)
    AB031478, AB209248, AL520992, BC009965
    Consensus CDS
    CCDS928.1
    UniProtKB/Swiss-Prot
    Q9NPH0
    UniProtKB/TrEMBL
    X5D289
    Conserved Domains (1) summary
    cd07061
    Location:49379
    Blast Score: 354
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000001.11 

    Range
    147647366..147670512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006711363.1XP_006711426.1  

    Conserved Domains (1) summary
    cd07061
    Location:49336
    Blast Score: 399
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction
  2. XM_006711364.1XP_006711427.1  

    Conserved Domains (1) summary
    cd07061
    Location:49159
    Blast Score: 263
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction
  3. XM_005277400.1XP_005277457.1  

    See proteins identical to XP_005277457.1

    UniProtKB/TrEMBL
    X5D319
    Conserved Domains (1) summary
    cd07061
    Location:49202
    Blast Score: 220
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

Alternate HuRef

Genomic

  1. AC_000133.1 

    Range
    120532766..120556091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 

    Range
    149015492..149038638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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