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SNRPA small nuclear ribonucleoprotein polypeptide A [ Bos taurus (cattle) ]

Gene ID: 509802, updated on 13-Apr-2024

Summary

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Official Symbol
SNRPAprovided by VGNC
Official Full Name
small nuclear ribonucleoprotein polypeptide Aprovided by VGNC
Primary source
VGNC:VGNC:35074
See related
BGD:BT18607; Ensembl:ENSBTAG00000009077
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
U1A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (50020497..50032624)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112442317 Neighboring gene coenzyme Q8B Neighboring gene inositol-trisphosphate 3-kinase C Neighboring gene actin maturation protease Neighboring gene MIA SH3 domain containing Neighboring gene RAB4B, member RAS oncogene family Neighboring gene microRNA mir-12057

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC137110

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U1 small nuclear ribonucleoprotein A
Names
U1 snRNP A
U1 snRNP protein A
U1-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046039.2 → NP_001039504.1  U1 small nuclear ribonucleoprotein A

    See identical proteins and their annotated locations for NP_001039504.1

    Status: PROVISIONAL

    Source sequence(s)
    BC112544
    UniProtKB/Swiss-Prot
    Q2KIR1
    Related
    ENSBTAP00000011963.4, ENSBTAT00000011963.5
    Conserved Domains (2) summary
    cd12477
    Location:7 → 95
    RRM1_U1A; RNA recognition motif 1 (RRM1) found in vertebrate U1 small nuclear ribonucleoprotein A (U1A)
    cd12480
    Location:197 → 282
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    50020497..50032624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024978092.2 → XP_024833860.1  U1 small nuclear ribonucleoprotein A isoform X1

    UniProtKB/Swiss-Prot
    Q2KIR1
    Conserved Domains (2) summary
    cd12477
    Location:7 → 95
    RRM1_U1A; RNA recognition motif 1 (RRM1) found in vertebrate U1 small nuclear ribonucleoprotein A (U1A)
    cd12480
    Location:197 → 282
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KIR1.1 GenPept UniProtKB/Swiss-Prot:Q2KIR1

Gene LinkOut

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