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FNDC3A fibronectin type III domain containing 3A [ Bos taurus (cattle) ]

Gene ID: 508840, updated on 3-Apr-2024

Summary

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Official Symbol
FNDC3Aprovided by VGNC
Official Full Name
fibronectin type III domain containing 3Aprovided by VGNC
Primary source
VGNC:VGNC:29062
See related
BGD:BT19117; Ensembl:ENSBTAG00000020681
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (18727163..18841004)

Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene cysteinyl leukotriene receptor 2 Neighboring gene uncharacterized LOC101903925 Neighboring gene uncharacterized LOC112449038 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC132346701 Neighboring gene uncharacterized LOC101904090 Neighboring gene motilin receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibronectin type-III domain-containing protein 3A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205646.1 → NP_001192575.1  fibronectin type-III domain-containing protein 3A

    See identical proteins and their annotated locations for NP_001192575.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000012
    UniProtKB/TrEMBL
    A0A3Q1LW57, A0A3Q1M2M6
    Related
    ENSBTAP00000059615.2, ENSBTAT00000071650.2
    Conserved Domains (2) summary
    cd00063
    Location:467 → 559
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:875 → 940
    fn3; Fibronectin type III domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    18727163..18841004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010810679.4 → XP_010808981.1  fibronectin type-III domain-containing protein 3A isoform X3

    See identical proteins and their annotated locations for XP_010808981.1

    UniProtKB/TrEMBL
    A0A3Q1LW57, A0A3Q1M2M6
    Conserved Domains (2) summary
    cd00063
    Location:467 → 559
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:875 → 940
    fn3; Fibronectin type III domain

  2. XM_024999822.2 → XP_024855590.1  fibronectin type-III domain-containing protein 3A isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LW57, A0A3Q1M2M6
    Conserved Domains (2) summary
    cd00063
    Location:467 → 559
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:875 → 940
    fn3; Fibronectin type III domain

  3. XM_024999821.2 → XP_024855589.1  fibronectin type-III domain-containing protein 3A isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M2M6, E1B8X1
    Conserved Domains (2) summary
    cd00063
    Location:481 → 573
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:889 → 954
    fn3; Fibronectin type III domain

  4. XM_024999823.2 → XP_024855591.1  fibronectin type-III domain-containing protein 3A isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M2M6, E1B8X1
    Conserved Domains (2) summary
    cd00063
    Location:481 → 573
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:889 → 954
    fn3; Fibronectin type III domain

  5. XM_005213592.5 → XP_005213649.1  fibronectin type-III domain-containing protein 3A isoform X3

    See identical proteins and their annotated locations for XP_005213649.1

    UniProtKB/TrEMBL
    A0A3Q1LW57, A0A3Q1M2M6
    Conserved Domains (2) summary
    cd00063
    Location:467 → 559
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:875 → 940
    fn3; Fibronectin type III domain

  6. XM_005213588.5 → XP_005213645.1  fibronectin type-III domain-containing protein 3A isoform X2

    See identical proteins and their annotated locations for XP_005213645.1

    UniProtKB/TrEMBL
    A0A3Q1M2M6, E1B8X1
    Related
    ENSBTAP00000032499.5, ENSBTAT00000032568.6
    Conserved Domains (2) summary
    cd00063
    Location:481 → 573
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:889 → 954
    fn3; Fibronectin type III domain

  7. XM_015473763.2 → XP_015329249.1  fibronectin type-III domain-containing protein 3A isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M2M6, E1B8X1
    Conserved Domains (2) summary
    cd00063
    Location:481 → 573
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:889 → 954
    fn3; Fibronectin type III domain

  8. XM_005213591.5 → XP_005213648.1  fibronectin type-III domain-containing protein 3A isoform X3

    See identical proteins and their annotated locations for XP_005213648.1

    UniProtKB/TrEMBL
    A0A3Q1LW57, A0A3Q1M2M6
    Conserved Domains (2) summary
    cd00063
    Location:467 → 559
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:875 → 940
    fn3; Fibronectin type III domain

  9. XM_005213587.5 → XP_005213644.4  fibronectin type-III domain-containing protein 3A isoform X1

    Related
    ENSBTAP00000067683.1, ENSBTAT00000086382.2
Nucleotide Protein Strain
Heading Accession and Version

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