These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_015726.3 → NP_056541.2 DDB1- and CUL4-associated factor 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the functional protein.
- Source sequence(s)
-
AK303188, AL139011, BC099709, BU629460, DA622120
- Consensus CDS
-
CCDS1200.1
- UniProtKB/TrEMBL
-
B7Z8C9
- UniProtKB/Swiss-Prot
-
Q5TAQ9
- Related
- ENSP00000357053, OTTHUMP00000029884, ENST00000368074, OTTHUMT00000077403
- Conserved Domains (1) summary
-
- cl02567
Location:189 – 506
Blast Score: 268
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
NR_028103.1 RNA Sequence
- Description
- Transcript Variant: This variant (2) contains an alternate 5' exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is expected to inhibit the translation of the longest ORF; translation of the upstream ORF would result in nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL139011, BC099709, BU629460, DC296401
-
NR_028104.1 RNA Sequence
- Description
- Transcript Variant: This variant (3) contains an alternate 5' exon and lacks an internal exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is expected to inhibit the translation of the longest ORF; translation of the upstream ORF would result in nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK312690, AL139011, BC099709, BU629460, DC296401
-
NR_028105.1 RNA Sequence
- Description
- Transcript Variant: This variant (4) contains an alternate exon in the 5' region and differs in the presence and absence of exons in the 3' region, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is expected to inhibit the translation of the longest ORF; translation of the upstream ORF would result in nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC111063, DC296401
-
NR_028106.1 RNA Sequence
- Description
- Transcript Variant: This variant (5) contains an alternate exon and uses an alternate splice site in the 5' region, and differs in the presence and absence of exons in the 3' region, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is expected to inhibit the translation of the longest ORF; translation of the upstream ORF would result in nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC013107, BC111063, BP359560
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000001.10 Reference GRCh37.p5 Primary Assembly
- Range
- 160185505..160232350, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000133.1 Alternate HuRef
- Range
- 131542143..131588999, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)